Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0324 ATGTCTGCTGTTGGTAATAATGGTACTCTGCAGGTTACTTTTATTGAAGCTTTAGACCAGCTCATGCCGGGATTTGATCCTGAAATTAGCAAGTTGGCTCAGAGGGTTCTCATAAATCCCCGGAATATTGACTATCATACTGGAGTTTTTGCATCCAAGATCACTCCTGCAAGAGATGGAAAACCTGTCACAATTGAGCTCATTGATGCAAAGACCAAGGAACAAAAGGACAGTTTAGAGGTGGATGCTGCACTAATAGCAACAGGAAGGGCTCCATTTACACAAGGTCTTGGATTGGAGAATATTGATGTTGTAACACAGCGTGGTTTTGTTCCTGTGGATGAGCGCATGAGAGTACTTGATGCAAATGGAAACCTGGTTCCTCATTTGTATTGCATTGGTGATGCAAATGGCAAGATGATGCTTGCTCATGCTGCCAGTGCACAAGGAATTTCAGTGGTTGAACAAGTCACTGGAAGAGATCACGTGCTCAATCATTTAAGCATACCAGCTGCTTGTTTCACTCATCCTGAAATCAGCATGGTTGGATTGACTGAGCCTCAAGCAAGGGAGAAAGCTGAAAAGGAGGGTTTTGAAGTAAGTGTTGCCAAAACAAGTTTTAAAGCTAACACAAAGGCCTTAGCTGAAAACGAAGGGGAGGGTCTTGCCAAGTTGATATACAGACCTGACACTGGAGAGATATTGGGAGTCCATATATTTGGGTTGCATGCTGCTGATCTCATCCACGAGGCATCCAATGCAATAGCACTAGGATCACACATTCAGGATATAAAATTTGCAGTTCATGCTCATCCGACTTTGTCTGAGGTGCTTGATGAGCTATTTAAATCAGCAAAGGTTAAAGCACAAGCTTCTGAGCCAGTAAAGGAAGCTGTTGCAGTTTAA 906 0.4305 MSAVGNNGTLQVTFIEALDQLMPGFDPEISKLAQRVLINPRNIDYHTGVFASKITPARDGKPVTIELIDAKTKEQKDSLEVDAALIATGRAPFTQGLGLENIDVVTQRGFVPVDERMRVLDANGNLVPHLYCIGDANGKMMLAHAASAQGISVVEQVTGRDHVLNHLSIPAACFTHPEISMVGLTEPQAREKAEKEGFEVSVAKTSFKANTKALAENEGEGLAKLIYRPDTGEILGVHIFGLHAADLIHEASNAIALGSHIQDIKFAVHAHPTLSEVLDELFKSAKVKAQASEPVKEAVAV* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0324 301 Pfam Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 169 280 IPR004099 GO:0045454
Gso9g0324 301 PANTHER DIHYDROLIPOAMIDE DEHYDROGENASE 11 293 - -
Gso9g0324 301 Gene3D - 168 293 IPR016156 GO:0016491|GO:0050660
Gso9g0324 301 Gene3D - 89 156 IPR036188 -
Gso9g0324 301 Gene3D - 10 88 IPR036188 -
Gso9g0324 301 SUPERFAMILY FAD/NAD(P)-binding domain 34 188 IPR036188 -
Gso9g0324 301 SUPERFAMILY FAD/NAD-linked reductases, dimerisation (C-terminal) domain 168 282 IPR016156 GO:0016491|GO:0050660
Gso9g0324 301 Pfam Pyridine nucleotide-disulphide oxidoreductase 11 150 IPR023753 GO:0016491
Gso9g0324 301 PRINTS Pyridine nucleotide disulphide reductase class-I signature 82 96 - -
Gso9g0324 301 PRINTS Pyridine nucleotide disulphide reductase class-I signature 130 137 - -
Gso9g0324 301 PRINTS Pyridine nucleotide disulphide reductase class-I signature 165 186 - -
Gso9g0324 301 PRINTS Pyridine nucleotide disulphide reductase class-I signature 234 249 - -
Gso9g0324 301 PRINTS Pyridine nucleotide disulphide reductase class-I signature 256 276 - -
Gso9g0324 301 PANTHER DISULFIDE OXIDOREDUCTASE 11 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0324 Gso-Chr9 3125459 3129944 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0324 11 292 Acyl Lipid Metabolism Gene Families AT4G16155 90.426 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0324 K00382 - gmx:100803176 562.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1190 15 11816460 11822260 Gso9g0324 9 3125459 3129944 GST
Gso7g2039 7 44372294 44378200 Gso9g0324 9 3125459 3129944 PCT
Gso17g0261 17 2362495 2371310 Gso9g0324 9 3125459 3129944 PCT
Gso9g0324 9 3125459 3129944 Gso7g2039 7 44372294 44378200 PCT
Gso9g0324 9 3125459 3129944 Gso17g0261 17 2362495 2371310 PCT