Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0268 ATGATTAATGAAGGAGCCCCAGAGTATTTTTGTTATCAGAACGTGTATTACCCTGCTGCCACCAATTATGGGTATTACTGTACAGGATTTGAAACACCCGGGGAATGGGAGGACCACCATAGGATTTTTGGTGTAGATGGTCCCAATATTCAGTTCATGGGTGCACAAAATGAAAGTTTGCCGTATGTATATTATAACTATGGATATGCACAGTCTCCATACAATCCATATAATCCTTACATTCCTGGTGCTATGATTGGAGCTGATGGCTCACTTGGAGGAGGACAACATTATTATACCCTCCCCAATTATCAAAGTCCAGTTTCTGCACCTGGTTATATTCCCTCTGTTCAACCAGACAATTTTTCTGATAGTTCTGCAGATTCCTTTTTTGGAGCCAGTGCTTCTGTCAGTAAACCTGATGGAAGAGGTTTGAGACATAAGTTCAATTCAGCTTCTGGTAACTTTCCTAGGAATTCTTCAAATTTTTTATCAAATCAGACAAGTTCCTTGGCCAGGGTATCAGAAAGGCCGAGAGCTTATGATGGGAGTAGATTTCTCAATTTAGCTTTGCCGGCTGTTCATCGGTCTGCAGCTGCTAAACTTAGGCCAAAGCTTCACAATGGCAAAGTAGTACCAAATGGTGGAAATGGGAGCTCTGATGTATTGGGTGAGCAAAATCAAGGCCCTAGAGTTAGTAGATCAAAACATCAGCTGTCTGTGAAAGCCTATACAACCATGGCAGGAGATGCTAATGAACAGGGGAACATTGTCATATATCCTGATCAATACAATAAGGAGGACTTTTCCCTTGACTATGAAAATGCAAAGTTTTTTGTTATAAAATCATACAGTGAGGATGATGTGCACAAAAGCATTAAATATAATGTGTGGTCATCAACACCTCATGGAAACAAGAAGCTGGAGAATGCTTATGAGGATGCAAAGAAAATAGCAGCTGAAAAGTCTGAAGTGTGCCCTATTTTCCTATTTTTTTCTGTTAATGCAAGTGGGCAGTTCTGTGGGGTAGCAGAGATGGTTGGTACAGTTGATTTTAACAAGAATATGGACTTTTGGCAGCAAGATAAATGGAGTGGAAGCTTTCCTTTGAAGTGGCACATCATAAAAGATGTACCAAATCCAAATTTTAGGCACATTACACTGGAGAACAATGAAAATAAGCCAGTAACTAATAGCAGAGACACACAAGAGATAATGTATTGGAAAGGTTTGGAAATGCTGAAAATATTCAAAAATAATACACTGAAGACATCTTTGCTTGATGACTTTATGTACTATGAAAACCGTCAAAAGATCATGCAGGATGAGAAAGCCAAGTTGCTAGTCAAGAGTTTCAATAGTCCAATATTTGTACCAGTATTAGAAGCTCCCCAAAAGTTGAATTTTGTTGTTGATTTACTAAAAGACAATTATGAGAAGAATTTGAAGCCCAAGGATGATTCTGATGGCTTCAAACAGATTTCAGTTTCAAGCCCTGACCAGATTGTTAGTAATTCTGATGTCACTGGCATCAAGCATGTGGATGATGAGAAAGCTGAGAAAATTGCTGTGGATAAAGAAGATATTTCTTCTATCTTAAAGATTGGTTCAGTCACTATTGCCCCCAAACAAGTTGAGGCTAAGCACTCTGTCAGCAATGGTAATAAAGAACAAGGTGATGCTCTTACGGAAGGCTCAATGCAGGTAAAAGTTAATGGGTTTGCTTTGCCTTCTGGTTTCTTGAAGGTTGGCAGTATCCCACTTGATGCAATGGCATTGCAACCGGGAAAAGGTGTTCTTTCTGTTAAAAGTGAATCACATCGTTAA 1827 0.3919 MINEGAPEYFCYQNVYYPAATNYGYYCTGFETPGEWEDHHRIFGVDGPNIQFMGAQNESLPYVYYNYGYAQSPYNPYNPYIPGAMIGADGSLGGGQHYYTLPNYQSPVSAPGYIPSVQPDNFSDSSADSFFGASASVSKPDGRGLRHKFNSASGNFPRNSSNFLSNQTSSLARVSERPRAYDGSRFLNLALPAVHRSAAAKLRPKLHNGKVVPNGGNGSSDVLGEQNQGPRVSRSKHQLSVKAYTTMAGDANEQGNIVIYPDQYNKEDFSLDYENAKFFVIKSYSEDDVHKSIKYNVWSSTPHGNKKLENAYEDAKKIAAEKSEVCPIFLFFSVNASGQFCGVAEMVGTVDFNKNMDFWQQDKWSGSFPLKWHIIKDVPNPNFRHITLENNENKPVTNSRDTQEIMYWKGLEMLKIFKNNTLKTSLLDDFMYYENRQKIMQDEKAKLLVKSFNSPIFVPVLEAPQKLNFVVDLLKDNYEKNLKPKDDSDGFKQISVSSPDQIVSNSDVTGIKHVDDEKAEKIAVDKEDISSILKIGSVTIAPKQVEAKHSVSNGNKEQGDALTEGSMQVKVNGFALPSGFLKVGSIPLDAMALQPGKGVLSVKSESHR* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0268 608 PANTHER EVOLUTIONARILY CARBOXY-TERMINAL REGION PROTEIN 1 592 - -
Gso9g0268 608 Gene3D ph1033 like domains 259 432 - -
Gso9g0268 608 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 1 592 IPR045168 -
Gso9g0268 608 Pfam YT521-B-like domain 276 418 IPR007275 GO:0003723
Gso9g0268 608 Coils Coil 305 325 - -
Gso9g0268 608 MobiDBLite consensus disorder prediction 206 237 - -
Gso9g0268 608 MobiDBLite consensus disorder prediction 213 237 - -
Gso9g0268 608 ProSiteProfiles YTH domain profile. 276 417 IPR007275 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0268 Gso-Chr9 2536231 2540542 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0268 K20102 - gmx:100784464 1072.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1142 15 11026793 11031688 Gso9g0268 9 2536231 2540542 GST
Gso7g1986 7 43829148 43834229 Gso9g0268 9 2536231 2540542 PCT
Gso17g0318 17 2841202 2846369 Gso9g0268 9 2536231 2540542 PCT
Gso9g0268 9 2536231 2540542 Gso7g1986 7 43829148 43834229 PCT
Gso9g0268 9 2536231 2540542 Gso17g0318 17 2841202 2846369 PCT