Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0318 ATGGAAATGTATGATGTTTCTGAAACTAGAAATGCAGATGCTTATTTGATTGAAGGCACTGATTTAAACTTACATCTGACAAGCCCAAATATTCAACAATTTCAAGCCATGTTTAATGATGGAGCCCCTGAATTTGTTGCTGATCAGAACTTGTATTACCCTGCTGCCACCAATTATGGGTATTACTGTACAGGATTTGAATCACCCGGAGAATGGGAGGACCACCATAGGATTTTTGGTGTAGATGGTCCTGATATTCAGTACACAGGTGCACAAAACGAAAGTTTTCCATATGTATATTATACACCTAGCTATGGATTTGCACAGTCTCCATACAATCCATACAATCCTTATATTCCTGGTGCAATGATAGGAGTTGATGGTTCATTTGGAGGAGCAGAGCAATATTACTCCCTCCCCAATTATCAAAACACTATTTCTTCACCTGCTTATATTCCTGTTGTTCAACCTGACAATTTCCCTAACAGTTCTGTTGACTCATCGTTTGATACCAGTGCTTCTGTCAGCAGACCTGATGGAAAAGGTTTAAAACATAAGTTCAATTCAGCTTCTGGTTCCTTTACTAGGAACTCTTCAAAATCATTATCAAATCCCACAAGTTCCTTGGCCAGGATATCAGAAGGTCCGAGAGATAATACTGGGGTGAAGAAAGATTTGACAAGTGGCAGGGGTTTTCTTAATATGGCTTCCTCACCTGTCCATCAGGCCAGAAGCATTGATGCCTCGACCCATGCTGTAGATATTTCCAATGGAAATGTTTTGTCCCATAGTAATCAATTAAAAATAGCTTCCCCTCTGAGTAGTGGATTTTCTGATTATGGATCTAATGCTAATGGACAGTCTGTGGTTGCTAAACTTCGACCAAAGGTTCATGTAGGTAAAGGACTGAGTGAAGTAAATGGAAGTTCTGATGTTTTAGGTGAGCAAAATCGGGGCCCGAGAATTAGTAATTATAAGTCAAAATTTCCACTGGCTGTCAAAGCCTATGCAAATAAAGGAGATGACAATACACAAGAGAATATCATCATTTCTACTGATCAATATAACAGGGAGGATTTCCCTGTCAATTATGAAAATGCAAAGTTTTTTGTTATAAAATCGTACAGTGAAGATGATGTGCACAAAAGCATTAAATATAATGTGTGGTCATCAACACCTCATGGAAACAAGAAGCTGCAGAGTACTCATGAAGATGCTAAGAGAATAGCTTCTGGAAATTTTGGAAGCTGCCCTATCTTTCTTTTCTTTTCTGTTAATGCAAGTGGTCAATTTTGTGGGGTTGCAGAGATGATTGGACCTGTTGACTTCAATAAGGACATGGACTTTTGGCAGCAAGATAAATGGAGTGGGAGCTTCCCTGTAAAGTGGCACATCATAAAAGATGTGCCAAATGCAAATTTTAGGCACATTATACTAGAGAACAATGAGAACAAACCTGTCACTAATAGCAGAGACACACAAGAGATAATGTATAGTAAAGGTTTGGAAATGCTGAAAATATTCAAAAACCATAATTTGAAGACATCTTTGCTTGATGACTTTATGTATTATGAAAATCGTCAGAAGATCATGCAGGAAGAAAAGGCCAAGTTGCTAATTAGAAGTTTTAAAAATCCGTTAGTGTTACCCACATTAGAACCACCTCGTAAGTTGAATTTTGTCATTGACATCCCTCCAGTTGGTGATGAGAAAAATGCAAAGATGGATGACGAGGTTGATAGCCTAAAACAGATTTCAAGTGCTGGACATATTGTTAGTAGTTCTGAGATCACCAGCACTACATCTGTGGATGAAAAGGCTGAGAAAGGTTCAGTTGATAAAGAAGATATTGCTTCTGTCCTTAAGATTGGTTCAGTTACTATTACCCCAAAACAGGTGGAGACTAAACCATCTGGCATTAGTGTTGCTAATAAGGAACCGCTTGATGTTATCACAGTAGGCTCAATGCAAATCAGAGTTAATGGATTTGCCGAGTCATCCGGTTTTTTGAAGATTGGGACTATTCCCCTTGATCCAAGAACACTACAGCTGGACGGAGGTTCTCGTGTTAAAAATGGATCTTAA 2085 0.3861 MEMYDVSETRNADAYLIEGTDLNLHLTSPNIQQFQAMFNDGAPEFVADQNLYYPAATNYGYYCTGFESPGEWEDHHRIFGVDGPDIQYTGAQNESFPYVYYTPSYGFAQSPYNPYNPYIPGAMIGVDGSFGGAEQYYSLPNYQNTISSPAYIPVVQPDNFPNSSVDSSFDTSASVSRPDGKGLKHKFNSASGSFTRNSSKSLSNPTSSLARISEGPRDNTGVKKDLTSGRGFLNMASSPVHQARSIDASTHAVDISNGNVLSHSNQLKIASPLSSGFSDYGSNANGQSVVAKLRPKVHVGKGLSEVNGSSDVLGEQNRGPRISNYKSKFPLAVKAYANKGDDNTQENIIISTDQYNREDFPVNYENAKFFVIKSYSEDDVHKSIKYNVWSSTPHGNKKLQSTHEDAKRIASGNFGSCPIFLFFSVNASGQFCGVAEMIGPVDFNKDMDFWQQDKWSGSFPVKWHIIKDVPNANFRHIILENNENKPVTNSRDTQEIMYSKGLEMLKIFKNHNLKTSLLDDFMYYENRQKIMQEEKAKLLIRSFKNPLVLPTLEPPRKLNFVIDIPPVGDEKNAKMDDEVDSLKQISSAGHIVSSSEITSTTSVDEKAEKGSVDKEDIASVLKIGSVTITPKQVETKPSGISVANKEPLDVITVGSMQIRVNGFAESSGFLKIGTIPLDPRTLQLDGGSRVKNGS* 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0318 694 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 2 680 IPR045168 -
Gso17g0318 694 Gene3D ph1033 like domains 344 523 - -
Gso17g0318 694 ProSiteProfiles YTH domain profile. 367 508 IPR007275 GO:0003723
Gso17g0318 694 Pfam YT521-B-like domain 367 509 IPR007275 GO:0003723
Gso17g0318 694 MobiDBLite consensus disorder prediction 163 223 - -
Gso17g0318 694 MobiDBLite consensus disorder prediction 188 214 - -
Gso17g0318 694 PANTHER EVOLUTIONARILY CARBOXY-TERMINAL REGION PROTEIN 2 680 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0318 Gso-Chr17 2841202 2846369 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0318 K20102 - gmx:100818167 1395.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0318 17 2841202 2846369 Gso17g0318 17 2841202 2846369 ECH
Gso7g1986 7 43829148 43834229 Gso17g0318 17 2841202 2846369 GST
Gso17g0318 17 2841202 2846369 Gso15g1142 15 11026793 11031688 PCT
Gso17g0318 17 2841202 2846369 Gso9g0268 9 2536231 2540542 PCT
Gso15g1142 15 11026793 11031688 Gso17g0318 17 2841202 2846369 PCT
Gso9g0268 9 2536231 2540542 Gso17g0318 17 2841202 2846369 PCT