Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1142 ATGGAAGTGTATGATGTTTCTGAAACTAGAAACCATGATGCAGACATGATTGAAGGTGCTGATTTAAATTCACACTTCACGAGCCCAAATATTGAACGAACTGAGGTCATGATTAACGAAGGAGCCCCTGAGTTTTTTGTTGACCAGAACTTGTATTACCCTGCTGCCACCAATTATGGGTATTACTGCTCAGGATTTGGAACACCCGGGGAACAGGAGGACCAGCATAGGATTTTTGGTGTAGATGGTCCCAATATTCAGTTCACGGGTGCACAAAATGAAAGTTTTCCGTATGTATATTATAGCTATGGATATGCACAGTCTCCATACAATCCATACAATCCTTACATTCCTGGTGCTATGATTGGAGCTGATGGCTCATTTGGAGGAGGACAACATTATTATACCCTCCCCAATTATCAAAGTCCAGTTTCTGCACCTGGTTATATTCCCCTTGTTCAACCTGACAATTTTTCTGATAGTTCTGCGGATTCCTTTTTTGGAGCCAGTGCTTCTGTCAGTAAACCTGATGGAAGAGGTTTGAAACCTAAGTTCAATTCAGCTTCTGGTAACTTTTCTAGGAACTCTTCAATTTTTTTATCGAATCAGACAAGTTCCTTGGCCAGGGCATCAGAAAGGCCGAGAGCTAATGATGGGAGGAAGCAAGGTTTGACACATGCAAGTGTTTCTGGGAGTAGTTTTCTCAATTTAGCTTCACCAGCTGTTCATCAGTCTGCAGTTGCTAAACTTAGGCCGAAGCTTCACATTGGCAAAGCAGTGCCAAATGGTGGAAATGGGAGCTCTGATGTATTGGGTGAGCAAAATCGAGGCCCTAGAGTTGGTAGATCAAAACATCAGCTGTCTGTGAAAGCCTATACAACCATGGCAGGAGATGGTAATGAACAGGGAAACATTGTCATTTATCCTGATCAATATAATATGGAGGACTTTCCCCTTGGCTATGAAAATGCCAAGTTTTTTGTTATAAAATCATATAGTGAGGATGATGTGCACAAAAGCATTAAATATAATGTGTGGTCGTCAACACCTCATGGAAACAAGAAGTTGGAGAATGCTTATGAGGATGCAAAGAAAATAGCAGCTGAAAAGTCTGAAGTGTGCCCTATTTTCCTATTGTTTTCTGTTAATGCAAGTGGACAGTTCTGTGGGGTTGCAGAGATGGTTGGTACAGTTGACTTTAGCAAGAATATGGACTTTTGGCAGCAAGATAAATGGAGTGGAAGCTTTCCTGTGAAGTGGCACATTATAAAAGATGTACCAAATCCAAATTTTAGGCACATTATACTGGAGAACAATGAAAATAAGCCAGTAACTAATAGCAGAGACGCACAAGAGATAATGTATTTGAAAGGTTTGGAAATGCTGAAAATATTCAAAAATCATACATTGAAGACATCTTTGCTTGATGACTTTATGTACTATGAAAACCGTCAAAAGATCATGCAGGATGAGAAAGCCAAGTTTCTAGTCAAGAGTTTTGATAGTCCAATATTTGTACCAGTATTAGAAGCTCCCCAAAAGTTGAATTTTTTTGTTGATGTACCAACAGACAATTATGAGAAGAATTTGAAGCCCAAGGATGATTCTGATGGCTTGAAACATATTTCATTTTCAAGTCCTGAGCAGATTGTTGGTAATTCTGATGTCACTGGCATCAAGCATGCGCATGATGAAAAAGATGAGAAAATTGCTGTTGATAAAGAACATATTTCTTCTATCTTAAAGATTGGTTCAGTCACTATTGCCCCCAAACAAGTTGAGGCTAAGCAATCCGTCAGCAATGGTAATAAAGAACCAGTTGATGTTCTTACAGTAGGCTCAATGCAGGTCAAAGTTAATGGGTTTCCTTCGTCTTCTGGTTTCTTGAAGGTTGGCAGTACCCCATTTGATGCAAGAGCATTACAACCGGGAAAAGGAGATGCTGCCGTTAAAAGTGGATCACAACGTTAA 1971 0.3983 MEVYDVSETRNHDADMIEGADLNSHFTSPNIERTEVMINEGAPEFFVDQNLYYPAATNYGYYCSGFGTPGEQEDQHRIFGVDGPNIQFTGAQNESFPYVYYSYGYAQSPYNPYNPYIPGAMIGADGSFGGGQHYYTLPNYQSPVSAPGYIPLVQPDNFSDSSADSFFGASASVSKPDGRGLKPKFNSASGNFSRNSSIFLSNQTSSLARASERPRANDGRKQGLTHASVSGSSFLNLASPAVHQSAVAKLRPKLHIGKAVPNGGNGSSDVLGEQNRGPRVGRSKHQLSVKAYTTMAGDGNEQGNIVIYPDQYNMEDFPLGYENAKFFVIKSYSEDDVHKSIKYNVWSSTPHGNKKLENAYEDAKKIAAEKSEVCPIFLLFSVNASGQFCGVAEMVGTVDFSKNMDFWQQDKWSGSFPVKWHIIKDVPNPNFRHIILENNENKPVTNSRDAQEIMYLKGLEMLKIFKNHTLKTSLLDDFMYYENRQKIMQDEKAKFLVKSFDSPIFVPVLEAPQKLNFFVDVPTDNYEKNLKPKDDSDGLKHISFSSPEQIVGNSDVTGIKHAHDEKDEKIAVDKEHISSILKIGSVTIAPKQVEAKQSVSNGNKEPVDVLTVGSMQVKVNGFPSSSGFLKVGSTPFDARALQPGKGDAAVKSGSQR* 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1142 656 Pfam YT521-B-like domain 324 466 IPR007275 GO:0003723
Gso15g1142 656 ProSiteProfiles YTH domain profile. 324 465 IPR007275 GO:0003723
Gso15g1142 656 Coils Coil 353 373 - -
Gso15g1142 656 MobiDBLite consensus disorder prediction 203 225 - -
Gso15g1142 656 Gene3D ph1033 like domains 308 480 - -
Gso15g1142 656 PANTHER EVOLUTIONARILY CARBOXY-TERMINAL REGION PROTEIN 2 640 - -
Gso15g1142 656 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 2 640 IPR045168 -
Gso15g1142 656 MobiDBLite consensus disorder prediction 258 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1142 Gso-Chr15 11026793 11031688 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1142 K20102 - gmx:100784464 1329.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1142 15 11026793 11031688 Gso9g0268 9 2536231 2540542 GST
Gso7g1986 7 43829148 43834229 Gso15g1142 15 11026793 11031688 PCT
Gso17g0318 17 2841202 2846369 Gso15g1142 15 11026793 11031688 PCT
Gso15g1142 15 11026793 11031688 Gso7g1986 7 43829148 43834229 PCT
Gso15g1142 15 11026793 11031688 Gso17g0318 17 2841202 2846369 PCT