Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2799 ATGGCAAAAACAACTCACATAGCTATTGTTTCAAGCCCTGGTTTTGGCCACATAGTTCCAATAATTGAGTTCAGCAAGCGACTTGTGAAGCTTCACCCAAATTTTCAAGTGACCTGCATCATTCCTTCACTTGAGTCATCCACAGAATCCTGCAAAGCCTACCTTAAAACCCTTCCTTCATTCATAGACTTCATCTTTCTTCCTCCAGTTAGCATAGAACAATTATCCCAAGGAGGATACATTGGACAGCTAATTCAACTCACTATTTCTCATTCTCTGCCATCAATACATGAGGTGCTGAAATCCTTGTTCTCTAAAGTCCCTTTAACTGCGTTGGTGGTAGATGTTCTTGCACTTCAAGCATTGGAATTTGCTAAGGAATTCAATGCCCTGTCCTATTTTTACTTCCCTAGTTCAGCTATGGTATTGTCACTGCTTCTACACATGTCAAAACTTGATGAGGAGGTTTCAAGTGCGTACAAGGATCTAACAGAACCTATAAGGTTACCAGGTTGTGTACCATTCATGGGGAGTGATCTTCCGGATCCATCCCATGATCGATCTAGTGAATTTTACAAGCATTTTGTTGAAGATACCAAGGCAATGGTAACTACTGATGGGATCTTGATCAACACCTTCTTAGAAATGGAATCAGGTGCTGTAAGAGCATTGGAAGAGTTTGGAAATGGAAAGATCAGATTGTACCCAGTTGGACCCATTACACAAAAAGGGTCAAGCAGTGAAGTTGACGAGTCTGATAAGTGTTTAAAATGGTTGGACAAGCAGCCACCTAGTTCAGTGTTGTATGTTTCTTTCGGAAGTGGTGGAACACTCTCTCAGAACCAAATCAATGAGTTAGCTTCGGGTTTGGAATTGAGTGGTCAAAGGTTCTTGTGGGTTTTGAGAGCACCAAGTGAATCAGTTAGTGCTGCATACCTTGAGGCTGCAAATGAGGACCCTTTGAAATTTTTACCAAGTGGGTTTTTAGAAAGGACAAAGGAGAAAGGTTTGGTTGTGCCATCATGGGCACCTCAGGTTCAGGTTCTTAGTCACAATTCAGTTGGAGGGTTCCTAAGCCATTGTGGTTGGAACTCAACTCTGGAGAGTGTCCAAGAAGGAGTGCCTATTATAACATGGCCACTCTTTGCTGAGCAGAGGATGAATGCAGTGATGTTAACCGATGGTCTTAAAGTGGCATTGAGGCCAAAATTTAACGAAGATGGCATAATTGAGAAGGAGGAAATTGCAAAGGTTGTAAAGTGTTTGATGGAAGGAGAGGAAGGTAAAGGAATGCGTGAAAGATTGAGGAATTTAAAAGATTCTGCTGCTAATGCACTGAAACACGGTTCTTCAACACAAACTCTGTCTCAGTTGGCTAATCATTGGGAGAATTTGACTAAAGTTTAG 1407 0.4165 MAKTTHIAIVSSPGFGHIVPIIEFSKRLVKLHPNFQVTCIIPSLESSTESCKAYLKTLPSFIDFIFLPPVSIEQLSQGGYIGQLIQLTISHSLPSIHEVLKSLFSKVPLTALVVDVLALQALEFAKEFNALSYFYFPSSAMVLSLLLHMSKLDEEVSSAYKDLTEPIRLPGCVPFMGSDLPDPSHDRSSEFYKHFVEDTKAMVTTDGILINTFLEMESGAVRALEEFGNGKIRLYPVGPITQKGSSSEVDESDKCLKWLDKQPPSSVLYVSFGSGGTLSQNQINELASGLELSGQRFLWVLRAPSESVSAAYLEAANEDPLKFLPSGFLERTKEKGLVVPSWAPQVQVLSHNSVGGFLSHCGWNSTLESVQEGVPIITWPLFAEQRMNAVMLTDGLKVALRPKFNEDGIIEKEEIAKVVKCLMEGEEGKGMRERLRNLKDSAANALKHGSSTQTLSQLANHWENLTKV* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2799 468 Gene3D Glycogen Phosphorylase B; 6 451 - -
Gso8g2799 468 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 266 400 IPR002213 GO:0008194
Gso8g2799 468 CDD GT1_Gtf-like 6 443 IPR002213 GO:0008194
Gso8g2799 468 Gene3D Glycogen Phosphorylase B; 253 447 - -
Gso8g2799 468 PANTHER UDP-GLYCOSYLTRANSFERASE 72B1 1 466 - -
Gso8g2799 468 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 6 462 - -
Gso8g2799 468 PANTHER GLYCOSYLTRANSFERASE 1 466 - -
Gso8g2799 468 ProSitePatterns UDP-glycosyltransferases signature. 342 385 IPR035595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2799 Gso-Chr8 45744606 45746368 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2799 2 463 Glycosyltransferase AT1G01420 46.352 8.17e-153 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2799 K08237 - gmx:100796096 908.672
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0611 1 14551296 14553843 Gso8g2799 8 45744606 45746368 GST
Gso3g0883 3 31800457 31802229 Gso8g2799 8 45744606 45746368 PCT