Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0883 ATGGAGAAAACGGTTCACATAGCAGTAGTTCCTGGTCCTGGCTTCAGCCACTTAGTCCCAATTCTTCAATTCTCAAAGAGACTTGTTCATCTCCATCAAAACTTTCATGTCACATGCATAATTCCCTCAGTAGGGTCTCCCTCATGTGCCTCAAAATCCATCCTTGAAACTCTTCCACCAAATATAACCTCTATTTTTCTTCAACCAGTGAAACCTGAAAACCTACCACAAGAGGTTGCTATAGAAGCCCAAATTCAGTTCACAGTGACCTTCTCTCTGCCATCTATACATCAAACCCTCAAGACCTTAACTTCAAGGACTCACTTTGTGGCCTTGGTGGCTGATTCTTTTGCCTTTGAGGCATTAGATTTTGCTAAAGAACTCAACATGTTGTCATATATTTACTTCCCTACATCAGCAACAACACTCTCTTGGTACTTGTATGTGCCCAAATTGGACAAGGAAACATCATGTGAGTATAGAGATTTTCCTGAGCCAATTCAAATACCAGGTTGTGTACCAATTCACGGCAGGGATCTCAATAACCAAGCTCAAGATCGATCGAGTCAAGCTTACAAACTCTTCGTCCAACGCGCTCAGCGACTCCCTTTGGTTGATGGGATTTTCATGAATACCTTCTTGGAAATGGAAACAAGTCCTATAAGAACATTGAAAGAGGAGGGAAGAGGGTCCCCTCTTGTGTATGATGTTGGACCAATTGTCCAAGGTGGTGATGATGATGCTAAAGGGTTGGACTTGGAGTGTTTAACGTGGTTGGACAAACAACAAGTCGGTTCTGTTTTGTTTGTTTCTTTTGGGAGTGGTGGAACACTCTCACAAGAGCAAATAACTGAGCTTGCTTGTGGTTTGGACTTGAGTAATCATAAGTTCTTATGGGTTGTGAGAGCACCAAGTAGTTTAGCCAGTGATGCATATCTCAGTGCACAAAATGATTTTGATCCTTCGAAATTCCTGCCATGTGGGTTTTTGGAGAGAACCAAAGAGAAAGGTATGGTTGTTCCTTCATGGGCACCCCAAATTCAAGTCCTTAGCCACAGTTCAGTTGGTGGATTCTTGACTCACTGTGGTTGGAATTCAATCCTCGAGAGTGTGCTAAAGGGTGTTCCATTCATCACATGGCCACTGTTTGCTGAGCAGAGAATGAATACGGTTTTGCTATGTGAGGGTCTCAAAGTTGGAGTGAGGCCAAGAGTTGGTGAAAATGGTTTGGTGGAAAGGGTTGAAATTGTGAAGGTGATAAAGTGTCTAATGGAAGAGGAAGAAGGTGAGAAAATGCGTGAAAGAATGAATGAGTTAAAAGAAGCTGCTATTAATGCTATCAAAGAAGATGGGTCTTCTACAAGGACCCTTTCTCAGTTAGCACTGAAGTGGAAGAGTTTGGCATAA 1407 0.4243 MEKTVHIAVVPGPGFSHLVPILQFSKRLVHLHQNFHVTCIIPSVGSPSCASKSILETLPPNITSIFLQPVKPENLPQEVAIEAQIQFTVTFSLPSIHQTLKTLTSRTHFVALVADSFAFEALDFAKELNMLSYIYFPTSATTLSWYLYVPKLDKETSCEYRDFPEPIQIPGCVPIHGRDLNNQAQDRSSQAYKLFVQRAQRLPLVDGIFMNTFLEMETSPIRTLKEEGRGSPLVYDVGPIVQGGDDDAKGLDLECLTWLDKQQVGSVLFVSFGSGGTLSQEQITELACGLDLSNHKFLWVVRAPSSLASDAYLSAQNDFDPSKFLPCGFLERTKEKGMVVPSWAPQIQVLSHSSVGGFLTHCGWNSILESVLKGVPFITWPLFAEQRMNTVLLCEGLKVGVRPRVGENGLVERVEIVKVIKCLMEEEEGEKMRERMNELKEAAINAIKEDGSSTRTLSQLALKWKSLA* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0883 468 Coils Coil 422 449 - -
Gso3g0883 468 Gene3D Glycogen Phosphorylase B; 6 453 - -
Gso3g0883 468 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 266 391 IPR002213 GO:0008194
Gso3g0883 468 CDD GT1_Gtf-like 6 423 IPR002213 GO:0008194
Gso3g0883 468 PANTHER GLYCOSYLTRANSFERASE 1 467 - -
Gso3g0883 468 Gene3D Glycogen Phosphorylase B; 247 448 - -
Gso3g0883 468 PANTHER UDP-GLYCOSYLTRANSFERASE 72B1 1 467 - -
Gso3g0883 468 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 6 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0883 Gso-Chr3 31800457 31802229 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0883 3 466 Glycosyltransferase AT1G01420 46.781 9.76e-161 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0883 K08237 - gmx:100778639 925.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g0883 3 31800457 31802229 Gso1g0611 1 14551296 14553843 PCT
Gso3g0883 3 31800457 31802229 Gso8g2799 8 45744606 45746368 PCT