Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0611 ATGGAGAAACCTCACGTAGCAGTGGTTCCAAGTCCTGGCTTCACCCATCTGGTTCCAATTCTTGAGTTCTCCAAACGCCTTCTTCATCTCCACCCAGAGTTTCACATCACTTGTTTCATTCCCTCAGTTGGGTCATCCCCGACTTCCTCCAAAGCATACGTTCAAACCCTTCCACCAACCATAACTTCCATTTTCCTTCCCCCAATCACCCTTGACCATGTGTCAGATCCCTCAGTCCTTGCACTCCAAATTGAACTCTCAGTGAATCTCTCTCTACCCTACATAAGGGAAGAATTGAAGTCTTTATGTTCAAGAGCCAAGGTTGTAGCTTTGGTTGTGGATGTTTTTGCTAATGGAGCATTGAACTTTGCCAAGGAACTCAACCTCCTGTCTTACATATACCTCCCTCAATCCGCTATGTTACTCTCTTTGTACTTCTACTCAACAAAACTTGATGAGATACTTTCTTCTGAGTCTAGGGAGCTACAAAAACCTATAGATATTCCTGGTTGTGTACCTATTCACAACAAAGATCTCCCTCTCCCTTTTCATGATCTATCTGGCCTAGGTTACAAGGGGTTTCTTGAACGGTCCAAGAGATTTCATGTTCCTGATGGTGTCTTCATGAACACCTTCCTTGAATTGGAGTCAGGGGCTATAAGAGCTTTGGAGGAACATGTCAAAGGGAAGCCAAAGCTTTACCCTGTTGGACCCATCATTCAGATGGAGTCAATTGGTCATGAAAATGGGGTAGAGTGTTTAACATGGTTGGATAAGCAAGAACCAAATTCTGTGTTGTATGTGTCATTTGGAAGTGGTGGCACACTTTCTCAAGAGCAATTCAATGAACTAGCCTTTGGGTTGGAACTGAGTGGTAAAAAATTTCTTTGGGTTGTGAGGGCCCCTAGCGGTGTGGTAAGTGCTGGTTACCTTTGTGCTGAAACTAAGGACCCTCTAGAGTTTTTGCCACATGGGTTTTTGGAGAGAACAAAGAAACAAGGTTTGGTTGTTCCTTCTTGGGCACCACAGATTCAAGTGCTGGGTCATAGTGCAACTGGGGGGTTCCTATCTCACTGTGGTTGGAACTCAGTGCTTGAAAGTGTTGTGCAGGGTGTGCCAGTGATCACATGGCCCCTCTTTGCTGAGCAGAGCTTGAATGCAGCTATGATAGCTGATGATTTAAAAGTGGCACTGAGGCCAAAAGTTAATGAAAGTGGATTGGTTGAAAGAGAAGAAATTGCTAAGGTTGTTAGAGGCTTGATGGGAGACAAGGAAAGCTTGGAAATTAGGAAAAGAATGGGACTATTGAAGATTGCTGCTGCTAATGCCATAAAAGAAGATGGATCATCCACAAAGACTCTGTCAGAGATGGCTACAAGTTTAAGAGGGTTTTAG 1395 0.4401 MEKPHVAVVPSPGFTHLVPILEFSKRLLHLHPEFHITCFIPSVGSSPTSSKAYVQTLPPTITSIFLPPITLDHVSDPSVLALQIELSVNLSLPYIREELKSLCSRAKVVALVVDVFANGALNFAKELNLLSYIYLPQSAMLLSLYFYSTKLDEILSSESRELQKPIDIPGCVPIHNKDLPLPFHDLSGLGYKGFLERSKRFHVPDGVFMNTFLELESGAIRALEEHVKGKPKLYPVGPIIQMESIGHENGVECLTWLDKQEPNSVLYVSFGSGGTLSQEQFNELAFGLELSGKKFLWVVRAPSGVVSAGYLCAETKDPLEFLPHGFLERTKKQGLVVPSWAPQIQVLGHSATGGFLSHCGWNSVLESVVQGVPVITWPLFAEQSLNAAMIADDLKVALRPKVNESGLVEREEIAKVVRGLMGDKESLEIRKRMGLLKIAAANAIKEDGSSTKTLSEMATSLRGF* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0611 464 Gene3D Glycogen Phosphorylase B; 5 450 - -
Gso1g0611 464 CDD GT1_Gtf-like 4 441 IPR002213 GO:0008194
Gso1g0611 464 Gene3D Glycogen Phosphorylase B; 248 445 - -
Gso1g0611 464 ProSitePatterns UDP-glycosyltransferases signature. 340 383 IPR035595 -
Gso1g0611 464 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 3 457 - -
Gso1g0611 464 PANTHER GLYCOSYLTRANSFERASE 1 464 - -
Gso1g0611 464 PANTHER UDP-GLYCOSYLTRANSFERASE 72B1 1 464 - -
Gso1g0611 464 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 263 391 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0611 Gso-Chr1 14551296 14553843 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0611 4 458 Glycosyltransferase AT1G01420 46.652 6.61e-142 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0611 K08237 - gmx:100776196 922.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0611 1 14551296 14553843 Gso8g2799 8 45744606 45746368 GST
Gso3g0883 3 31800457 31802229 Gso1g0611 1 14551296 14553843 PCT