Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2640 ATGGAGGCTCACGCGAGCTCCTTCGTGTCCAAAGCGCGAACTGCGTTCCATTCCGCAGCCGCGAAAGCGGAGCGTGTTCTCATGGACTTCAAAATCGATCTAGATTCTGATAAGCAATTTCACGACGAGTTTGGGAGGCAGCGGGGCGATGAATCTGCTCGGAGTGAGAAGTTTCTTGATGAACTGAAGCATATAAAGTGGAGACCTCCACATATAGGAACAAAGCAGGACTGGCAAGATAGAATAAACAACATGCGAAAAGGGAGAAAGGAAGTCGAAGTAACAGATAAAGTTGGCGATGTAAGCATGGCCTCTGCTCCATTTTATGATGAAAATATGTACATCCTCAATGTGAAAAATGATCTTGATGCCAAGGCTTCAGAAGCAATTCCCTCGGTTGAAGGCTTAACTGCTGCGACCAAATACCCCATTCCTCCATCATCTGTCCTGAAGCAGTTGGCTATAGCTATTGAGTCTGGAAGGCAAACAAACTCGATGAAAGATTTTGTAGCTTCATCAAGAGGTTCGTCACCTGCCAGAGAGAAGGCAGGCTTAAGTCTCTCTTCAGTGAAGGCTTTAGTGTTGCGTGAAAAGGAGGACAAACTCACCTCTGAGTTTAGTAGTGATGAGAAAGTTGTGTATTTGATTAATTCATTGTTTGATCAAGAGGGAGAGTTCCTTAAAAGGAACTCTGATCCAGAGGAAACTTTCATATCATCTTTGCCAAGAGATATTCATGGTGCACCTCTTGAAAGCCTAGTTGTTAAGCTAGCTGAAGTAATCGGAAACTTCAAGACGCTTCGAGAAATGTCTCTTTTTTGGTCCAGGGTTGTTGATGAACTGAGAAAACATTGGTCCGAAGAAAAACATTTGCCTGGAATCCCCCCAGATGACATTCCAGATCTGAAGTCATGTCTTCTGTATCAACAATTTCAAGTAATTAATTGTTGCATCTCTCGGAAAAAGCGCCATATTATTGCCACTGAATCTCTGGACACTATGGTGATGGAAGCCAATTCAAATGCATTAGAGTCAGCAAACTACACGGGCAAAATTCCTACAGGCCCTTTATTATATGCAAGATTAAGAACTGGAGAGCTTGTTCTCCGACTTGGTGCTGATTGCCCATCTGGAGATTTGACATTACTGGAGACTGGCGAGCCGGCATACTCTCCTGTCACCCAGGAGGGACCCTTGCTTACAGAAGATCTGATCAAAGAGACAGAGGAGTTTGTGCTGCGGACAGGGAGTGTTGGTGCTGGATGCTCTCAACTCCTCTCTGATATGCAGGCTTTCAAGGCTGCAAATCCTGGTTGCATTTTGGAAGATTTTGTGAGATGGTACTCTCCTCCTGATTGGAGTGAAAGTGAGGGAAGTACTGAGGATAGAGATTCTTCTTATGGTGGGGAGTCAATGTCTACCAGAGGTCAACTAAGTTTGCGAATGCAAAAAGAAGGTAATTTGTGGCGTGAATTGTGGGAAACATCTAAACCAGTTCCAGCTGTTAAACAGGCACCTCTCTATGATGAGGATTTGGCAGTGGAGGACATTCTAGATGCATTTGAGGACATCCAGCCTTCAGAGCTTTTTGGACAGCTGTTTGTTTCTCTTCTCAGTTTTGGATTTGCAATTGCTGAAACTATGCTGTATGGCGACCTTGATCTCTCAAAGTTGTTCAATGATTGCAAGGAGTACATAGTTACCACGTGTCAGAGTGACAGATTCAATGAGAAAATCGATGAACTTGTTCAGATGTATGAAACAGTGGAGAAAATGTTGCTGAATCCAGATGAGGCATTGAAGATGAAGCACATGGAAGAATCAACTATGACTACTGATGAATCAAAGCGCCGGTTTTCTACTGGTGAGCCAAAGCACCGGTTTAAGAGACTTAGCCATATCTTTGGTGGCAAGGATAAACTGTTGACAAGGCCGGTCTGTAAAAACGAGGTAAACGATGAAGAAACGCAGATTCGACATTCTTTCTCGAGTTTCTTTGACAGCAAGTCATCTTTATTTTCAAAGAAGCCACCTAAGCCTGGAAACCTATACCCTGCTGAGCAACCTCTCTCTCTGGAAAGTGACAGGACAGTTATTTAG 2100 0.4376 MEAHASSFVSKARTAFHSAAAKAERVLMDFKIDLDSDKQFHDEFGRQRGDESARSEKFLDELKHIKWRPPHIGTKQDWQDRINNMRKGRKEVEVTDKVGDVSMASAPFYDENMYILNVKNDLDAKASEAIPSVEGLTAATKYPIPPSSVLKQLAIAIESGRQTNSMKDFVASSRGSSPAREKAGLSLSSVKALVLREKEDKLTSEFSSDEKVVYLINSLFDQEGEFLKRNSDPEETFISSLPRDIHGAPLESLVVKLAEVIGNFKTLREMSLFWSRVVDELRKHWSEEKHLPGIPPDDIPDLKSCLLYQQFQVINCCISRKKRHIIATESLDTMVMEANSNALESANYTGKIPTGPLLYARLRTGELVLRLGADCPSGDLTLLETGEPAYSPVTQEGPLLTEDLIKETEEFVLRTGSVGAGCSQLLSDMQAFKAANPGCILEDFVRWYSPPDWSESEGSTEDRDSSYGGESMSTRGQLSLRMQKEGNLWRELWETSKPVPAVKQAPLYDEDLAVEDILDAFEDIQPSELFGQLFVSLLSFGFAIAETMLYGDLDLSKLFNDCKEYIVTTCQSDRFNEKIDELVQMYETVEKMLLNPDEALKMKHMEESTMTTDESKRRFSTGEPKHRFKRLSHIFGGKDKLLTRPVCKNEVNDEETQIRHSFSSFFDSKSSLFSKKPPKPGNLYPAEQPLSLESDRTVI* 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2640 699 MobiDBLite consensus disorder prediction 452 476 - -
Gso8g2640 699 Pfam Rab3 GTPase-activating protein catalytic subunit 370 522 IPR026147 -
Gso8g2640 699 MobiDBLite consensus disorder prediction 668 699 - -
Gso8g2640 699 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 5 699 IPR045700 GO:0005096|GO:0043547
Gso8g2640 699 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 5 699 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2640 Gso-Chr8 44060812 44069346 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2640 K18270 - gmx:100800515 1363.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g2640 8 44060812 44069346 Gso8g2640 8 44060812 44069346 ECH
Gso18g0777 18 9525387 9534022 Gso8g2640 8 44060812 44069346 GST
Gso8g2640 8 44060812 44069346 Gso14g0186 14 1620287 1628814 PCT
Gso8g2640 8 44060812 44069346 Gso2g2479 2 49283279 49291206 PCT
Gso14g0186 14 1620287 1628814 Gso8g2640 8 44060812 44069346 PCT
Gso2g2479 2 49283279 49291206 Gso8g2640 8 44060812 44069346 PCT