Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2479 ATGACTCTCAGCGTTTCAATCCTGACCTCATCATCTTCGCGTGTGCGCAGGGAATGGAGGAGCAGACTTTTGTTTCCAAAGCGAGAACCGCCTTTCATTCCGCGGCGGCGAAAGCGGAGCGTGTTCTCTTGGATTTCAAATCCGATCGAGTTATTATTGTTTTCGGAATTAGCATTGACTCAATTTGTTGACCGTCGTGAAGAAGATCACGATAAGCAATCGTCGCCAAACACCTTCACCGGCCAACAACCAGAAGCTGAATCTCCTCACACCAACGAAAACGATTCCAAGCTTCGTAGTGAATTGAAGCATATAAAGTGGAGGCCTCCACATTTAGGAATAAAGCAGGATTGGCAGGATAGAATAAAGAACATCCGTAGAGGGAGAAAAGAAGTTGAAGATACAGATAAAGTTGGGGATGCAAGCATGGCAGTTCCTTTTTATGACGATAATTTGTACCTCCTGAACATGAAGAATGATCTTGAGGCCAAGGCTTCAGAAGCAATTCCCTCAGTTGAAAGCTTAACTGCTGCAACTAAAGATCCCATTCCTCCATCATCTGTGCTAAAGCAATTGGCTATAGCTGTTGAGGCTGGAAGTAAGGCAAAGTCAATGAAAGATTTAATAGCTTCATCAGGAGTTTCTTCACCTGCTAGAGAGAGGGCAGGCTTAAGTTTCTCGGCAGTTAAGGCTTTAGTGCTACGTGAAAAGGAGGACAAACTTACATCTGAGTTTACTAGCAATGAGAAAGTTGTGCAGTTAATTAATTCTCTGTTTGATCCAGAAGGAGATTTCCTTAGAAGAAAGATCAACTCTAATCTAGAGGAAACTGCTATGACATCTTTGCCAAGAGATATTCATGGTGCACCTCCCGAGAGCCTTGTTGTTAAGCTAGCTGAAATCCTTGGAAACTACAAGACTCTTAGAAAAATGGCTCTTTTCTGGTGCAGGGTTGTTGCTGAACTAAGAAAACTATGGTCTGAGGAACAATACTTACCAGGAGTCCCCCAGAATGAGATTCCTGATCTGAAGTCATGTCTTCTATATCAACATTTTCAAGTAATTAATTGCTGCATCTCTCGGAAAAGGTTCCGTATTATTGCCACCGAATCTTTAGACTCTATGATGATGCAAGCTAATTCAGACATAAAAGAATCAACTGATTGTTGCGCTGGAGCTCCTGCAAGCCCTGTTCTATATGCTAGATTGAATAGTGGGGAGCTTGTTCTTCGACTTGGTGCAGATCATCCTGCTGGAGATATGACATTGTTGGAAACTGGCGAGCCTGTGTATTCTCCAATCACTCAGGAAGGACCTTTGCTTACAGAAGATCTAATCAGGGAAACAGAGGAGTTTGTGCTGCGGACAGGGAGTGTTGGTGCTGGGTGCTCTCAACTGCTCTCAGATATGCAAGCTTTCAAGGCTGCAAATCCTGGATGTATCTTGGAGGATTTTGTAAGATGGTACTCTCCTCCTGATTGGACAGATAATGAAGCAAGTACAGAGGATAGTGATGTTTTTGATAGTGGGGAGCCATTGTCTACCAGAGGTCAGCTAAGTCAGCGAATGCAAAAAGAAGGTAATTTGTGGCGTGAATTGTGGGAAACATCCAAACCAGTACCTGCTGTTAAGCAGGCACCTCTGTTTGATGAGGATTTGGCATTGGAGGGCATCCTCAATGCATTTGAAGACATCCATCCATCTGATCTTTTTGGACAGCTGTTTGTTTCGTTACTTGGTTTAGGATTTGCAATTGCCGAACCTATGCTGTCTAGTAACAGTGACTTCTCGAAGTTATTCTATGACTGCAAGGAGTACATAATTGTTGCTTGTCAAAACAACAAATTGAATGAGAAAGTTGATGATCTTGTTCAGGTATATGAAACAGTGGAGAAAATGTTATTGGATCCTGAAGAAGCTCTAAAGATGATTAGGCAGACAGAGGAATCAACAATGGTTACCGGTGAACCAAGGAGCCCGTTTAGGACGCTTAGCCTTATCTTTGGAGGCAAAGATAAATTATTGAGGAAGTCTGTCTCAAAAGATCAGACAAACGACGAAGAGAAGTCAGGTCGGCAGTCATTCTCTAGTTTCTTTGACAGCAAGTCATCTTTGTTTGGAAAGAAGCCTCCCAAGTCTGGGTTCCCATCTCCTTCTGCTAAATCTTCAATCGATACTGGTTGGACAGTTGTTTAG 2196 0.4285 MTLSVSILTSSSSRVRREWRSRLLFPKREPPFIPRRRKRSVFSWISNPIELLLFSELALTQFVDRREEDHDKQSSPNTFTGQQPEAESPHTNENDSKLRSELKHIKWRPPHLGIKQDWQDRIKNIRRGRKEVEDTDKVGDASMAVPFYDDNLYLLNMKNDLEAKASEAIPSVESLTAATKDPIPPSSVLKQLAIAVEAGSKAKSMKDLIASSGVSSPARERAGLSFSAVKALVLREKEDKLTSEFTSNEKVVQLINSLFDPEGDFLRRKINSNLEETAMTSLPRDIHGAPPESLVVKLAEILGNYKTLRKMALFWCRVVAELRKLWSEEQYLPGVPQNEIPDLKSCLLYQHFQVINCCISRKRFRIIATESLDSMMMQANSDIKESTDCCAGAPASPVLYARLNSGELVLRLGADHPAGDMTLLETGEPVYSPITQEGPLLTEDLIRETEEFVLRTGSVGAGCSQLLSDMQAFKAANPGCILEDFVRWYSPPDWTDNEASTEDSDVFDSGEPLSTRGQLSQRMQKEGNLWRELWETSKPVPAVKQAPLFDEDLALEGILNAFEDIHPSDLFGQLFVSLLGLGFAIAEPMLSSNSDFSKLFYDCKEYIIVACQNNKLNEKVDDLVQVYETVEKMLLDPEEALKMIRQTEESTMVTGEPRSPFRTLSLIFGGKDKLLRKSVSKDQTNDEEKSGRQSFSSFFDSKSSLFGKKPPKSGFPSPSAKSSIDTGWTVV* 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2479 731 MobiDBLite consensus disorder prediction 66 98 - -
Gso2g2479 731 MobiDBLite consensus disorder prediction 497 516 - -
Gso2g2479 731 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 68 721 IPR045700 GO:0005096|GO:0043547
Gso2g2479 731 Pfam Rab3 GTPase-activating protein catalytic subunit 411 563 IPR026147 -
Gso2g2479 731 MobiDBLite consensus disorder prediction 75 89 - -
Gso2g2479 731 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 68 721 - -
Gso2g2479 731 Coils Coil 613 633 - -
Gso2g2479 731 Coils Coil 115 135 - -
Gso2g2479 731 MobiDBLite consensus disorder prediction 716 731 - -
Gso2g2479 731 MobiDBLite consensus disorder prediction 678 731 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2479 Gso-Chr2 49283279 49291206 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2479 K18270 - gmx:100798096 1417.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0186 14 1620287 1628814 Gso2g2479 2 49283279 49291206 GST
Gso18g0777 18 9525387 9534022 Gso2g2479 2 49283279 49291206 PCT
Gso8g2640 8 44060812 44069346 Gso2g2479 2 49283279 49291206 PCT
Gso2g2479 2 49283279 49291206 Gso18g0777 18 9525387 9534022 PCT
Gso2g2479 2 49283279 49291206 Gso8g2640 8 44060812 44069346 PCT