Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0777 ATGGAACCTCACGCGAGTTCCTTCGTGTCCAAGGCGCGAACCGCGTTCCATTCCGCAGCCGCGAAAGCGGAGCGTGTTCTCACGGACTTCAAAATCGATCTAGATTCTGATAAGCAATTTCACGACGACGAGTTTGGGATGCAGCGGGGCGATGAATCTGCTCGAAGTGAGAATGAGTCAAAGTTTCGTAATGAACTGAAGCATATAAAGTGGAGACCTCCAGGTATAGGAACAAAGCAGGACTGGCAAGATAGAATAAACAACATACGGAAAGGGAGAAAGGAAGTTGAAGTAACAGATAAAGTTGGCGATGTAAACGTGGGCTCTGTTCCATTTTATGATGAAAATTTGTACATCCTCAATGTGAAAAATGATCTTGATGCCAAGGCTTCAGAAGCAATTCCCACGGTTGAAGGCTTAACTGCTGCGACCAAACATCCCATTCCTCCATCATCTGTCCTGAAGCAGTTGGCTATAGCTATTGAGGCTGGAAGGCAAACAAACTCAATGAAAGATTTTGTAGCTTCATCACCTGCCAGAGAGAAGGCAGGCTTAAGTATCTCTTCAGTGAAGGCTTTAGTGTTGCGTGAAAAGGAGGACAAACTCACCTCTGAGTTTAGTAGCGATGAGAAAGTTGTGTATTTGATTAATTCATTGTTTGACCAAGAGGGAGAGTTCCTTAGAAGGAAGATCAACTCTGATCCAGAGGAAACTTCCATATCATCTTTGCCAAGAGATATTCATGGTGCTCCTCCTGAAAGCCTAGTTGTTAAGCTAGCCGAAGTAATCGGAAACTTCAAGACGCTTCGAGGAATGTCTCTTTTTTGGTCCAGGGTTGTTGATGAACTGAGAAAACATTGGTCTGAAGAAAAACATTTACTTGGAGTCCCCCCAGATGACATTCCAGATCTGAAGTCATGTCTTCTGTATCAACAATTTCAAGTAATTAATTGTTGTATCTCTCGCAAAAGGCGCCATATTATTGCCATTGAATCTCTGGACTCTATGGTGATGGAAGCCAATTCAAATACATCAGACTCAGCGAACTACATGGGCAGAATTCCTACAAGCCCTTTATTATATGCAAGATTAAGAACTGGAGAGCTTGTTCTCCGACTTGGTGCTGATTGCCCATCTGGAGATCTGACGTTACTGGAGACTGGCGAGCCTGCATACTCTCCTGTCACCCAGGAGGGACCCTTGCTTACAGAAGATCTGATCAAAGAGACAGAGGAGTTTGTGCTGCGGACAGGAAGTGTTGGTGCTGGATGCTCTCAACTCCTCTCTGATATGCAGGCTTTCAAGGCTGCAAATCCTGGTTGCATTTTGGAAGATTTTGTGAGATGGTACTCGCCTCCTGATTGGATGGAAAGTGAGGGAAGTACTGAAGACAGAGATTCTTTTTATGGTGGTGAGTCAATGTCTAGCAGAGGTCAACTAAGTTTGCGAATGCAAAAAGAAGGTAATTTGTGGCGTGAATTGTGGGAAACATCTAAATCAGTTCCAGCTGTTAAACAGACACCTCTCTATGATGAGGATTTAGCAGTGGAGGGCATTCTAGATGCATTTGAGGACATCCAGCCTTCAGAGCTTTACAGACAGCTGTTTGTTTCTCTTCTCGGTTTAGGATTTGCAATTGCTGAAACTATGCTGTCTGGCGACATTGACACCTCAAAGTTGTTCAATGATTGCAAGGAGTACATAGTTACCACTTCTCAAAGTGACGGATTCCATGAGAAAGTCAATGAACTTGTTCAGATGTATGAAACGGTGGAGAAAATGTTGCTGAATCCAGACAAGGCACTGAAGATGATGAAGCACATGGAAGAATCAACTATGACTACTGATGAACCAAAGCGCAGGTTTTCTACTGGTGAGCCAAAGCACCGGTTTAAGCGATTTAGCCATATCTTTGGTGGCAAAGATAAACTGTTGACGCCTGTCAGGAAAGATGAGGTAAACGATGAAGAAAAGCAGATTCGACATTCTTTCTCAAGTTTCTTTGACAGCAAGTCATCTTTATTTTCAAAGAAGCCTCCTAAGCCTGGAAACCTATACCCTGGTGAGCAACCTCTCTCTCTGGAAAGATTGGACAGTTATTTAGACAAAGTTCAGTTTCACCCTATTTAG 2130 0.4347 MEPHASSFVSKARTAFHSAAAKAERVLTDFKIDLDSDKQFHDDEFGMQRGDESARSENESKFRNELKHIKWRPPGIGTKQDWQDRINNIRKGRKEVEVTDKVGDVNVGSVPFYDENLYILNVKNDLDAKASEAIPTVEGLTAATKHPIPPSSVLKQLAIAIEAGRQTNSMKDFVASSPAREKAGLSISSVKALVLREKEDKLTSEFSSDEKVVYLINSLFDQEGEFLRRKINSDPEETSISSLPRDIHGAPPESLVVKLAEVIGNFKTLRGMSLFWSRVVDELRKHWSEEKHLLGVPPDDIPDLKSCLLYQQFQVINCCISRKRRHIIAIESLDSMVMEANSNTSDSANYMGRIPTSPLLYARLRTGELVLRLGADCPSGDLTLLETGEPAYSPVTQEGPLLTEDLIKETEEFVLRTGSVGAGCSQLLSDMQAFKAANPGCILEDFVRWYSPPDWMESEGSTEDRDSFYGGESMSSRGQLSLRMQKEGNLWRELWETSKSVPAVKQTPLYDEDLAVEGILDAFEDIQPSELYRQLFVSLLGLGFAIAETMLSGDIDTSKLFNDCKEYIVTTSQSDGFHEKVNELVQMYETVEKMLLNPDKALKMMKHMEESTMTTDEPKRRFSTGEPKHRFKRFSHIFGGKDKLLTPVRKDEVNDEEKQIRHSFSSFFDSKSSLFSKKPPKPGNLYPGEQPLSLERLDSYLDKVQFHPI* 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0777 709 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 5 696 - -
Gso18g0777 709 MobiDBLite consensus disorder prediction 670 690 - -
Gso18g0777 709 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 5 696 IPR045700 GO:0005096|GO:0043547
Gso18g0777 709 Pfam Rab3 GTPase-activating protein catalytic subunit 372 524 IPR026147 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0777 Gso-Chr18 9525387 9534022 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0777 K18270 - gmx:100788608 1394.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0777 18 9525387 9534022 Gso8g2640 8 44060812 44069346 GST
Gso18g0777 18 9525387 9534022 Gso14g0186 14 1620287 1628814 PCT
Gso18g0777 18 9525387 9534022 Gso2g2479 2 49283279 49291206 PCT
Gso14g0186 14 1620287 1628814 Gso18g0777 18 9525387 9534022 PCT
Gso2g2479 2 49283279 49291206 Gso18g0777 18 9525387 9534022 PCT