Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1744 ATGTTGCGGAGGCTTCTCTCTTCTCACCTCAAAACCCTAGCCGCCACCGCTTCTTCTTCCACTCCCCGATCTGCTTCCGCCGCCGCCAGATTCGCCGCTCTCTCTCGCTCCTCCCGCTACTTCTCAACCCAGTCCGAGGATGCTACTGCCATCAAAAAGAAGGTTGAGGATGTAATGCCAATCGCTACTGGTCACGAGCGCGAGGAGCTTCAGGCTGAGCTCGAGGGAAGGAATATTCTTGAAATAGACCATCCCGAAGGTCCATTCGGCACGAAGGAAGCACCTGCTGTTGTCAAATCTTACTATGATAAAAGGATAGTCGGATGCCCAGGAGGTGAAGGTGAGGATGAGCATGATGTTGTCTGGTTTTGGCTGGAGAAAGACAAGCCCCACGAATGTCCAGTGTGCGCACAGTATTTTGTTCTTGAAGTGGTAGGACCTGGTGGATCACCCGATGGGCATGGCGATGATGATCACCATTGA 483 0.528 MLRRLLSSHLKTLAATASSSTPRSASAAARFAALSRSSRYFSTQSEDATAIKKKVEDVMPIATGHEREELQAELEGRNILEIDHPEGPFGTKEAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKDKPHECPVCAQYFVLEVVGPGGSPDGHGDDDHH* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1744 160 PANTHER CYTOCHROME C OXIDASE SUBUNIT 5B 1 160 - -
Gso8g1744 160 Pfam Cytochrome c oxidase subunit Vb 61 149 IPR002124 GO:0005740|GO:0005751|GO:0006123
Gso8g1744 160 PANTHER CYTOCHROME C OXIDASE SUBUNIT 5B, MITOCHONDRIAL 1 160 IPR002124 GO:0005740|GO:0005751|GO:0006123
Gso8g1744 160 SUPERFAMILY Rubredoxin-like 51 148 - -
Gso8g1744 160 CDD Cyt_c_Oxidase_Vb 50 147 IPR002124 GO:0005740|GO:0005751|GO:0006123
Gso8g1744 160 ProSiteProfiles Cytochrome c oxidase subunit Vb, zinc binding domain profile. 50 149 IPR002124 GO:0005740|GO:0005751|GO:0006123
Gso8g1744 160 Gene3D Cytochrome c oxidase, subunit Vb 51 145 IPR036972 GO:0005740|GO:0005751|GO:0006123
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1744 Gso-Chr8 17051746 17055725 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1744 K02265 - gmx:100780886 248.054
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0103 15 823980 827124 Gso8g1744 8 17051746 17055725 PCT
Gso11g3700 11 52662667 52665023 Gso8g1744 8 17051746 17055725 PCT
Gso8g1744 8 17051746 17055725 Gso15g0103 15 823980 827124 PCT
Gso8g1744 8 17051746 17055725 Gso11g3700 11 52662667 52665023 PCT