LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso15g0103	ATGTGGCGGAGACTCTTCTCTTCTTCAAACCTCAAATCCCTACACACAGCACTCTCTCCTTCTCGTCCCCGACTCGCCGCCCCTCTCCTCACCCGCCACGTGACCGCTCATTCAGGTGCTTCTTCCGTCAAAAGGAGGGTTGAAGATGTCGTGCCAATTGCTACCGGCCACGAGCGTGAGGAGATTCAGGCTGATCTTGAGGGAAGGGATATTCTTGAAATAAACCATCCCGTCGGCCCTTTTGGCACAAAGGAAGCACCTGCCGTTGTTAAATCTTACTTTGACAGAAGGATAGTTGGATGCCCAGGAGATGAAGGCGAAGATGAGCATGATGTTGTCTGGTTTTGGCTGGAGAAAGGCAAGCCTAAAGAATGTCCAGTGTGCTCACAGTATTTTAAGCTCGAAGTGGTCGGACCTGGTGGTGATCCTTATGGACATGGAGATCATGATCACCATTGA	459	0.5076	MWRRLFSSSNLKSLHTALSPSRPRLAAPLLTRHVTAHSGASSVKRRVEDVVPIATGHEREEIQADLEGRDILEINHPVGPFGTKEAPAVVKSYFDRRIVGCPGDEGEDEHDVVWFWLEKGKPKECPVCSQYFKLEVVGPGGDPYGHGDHDHH*	153

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso15g0103	152	Gene3D	Cytochrome c oxidase, subunit Vb	44	137	IPR036972	GO:0005740\|GO:0005751\|GO:0006123
	Gso15g0103	152	CDD	Cyt_c_Oxidase_Vb	42	139	IPR002124	GO:0005740\|GO:0005751\|GO:0006123
	Gso15g0103	152	PANTHER	CYTOCHROME C OXIDASE SUBUNIT 5B, MITOCHONDRIAL	1	152	IPR002124	GO:0005740\|GO:0005751\|GO:0006123
	Gso15g0103	152	SUPERFAMILY	Rubredoxin-like	43	140	-	-
	Gso15g0103	152	Pfam	Cytochrome c oxidase subunit Vb	54	142	IPR002124	GO:0005740\|GO:0005751\|GO:0006123
	Gso15g0103	152	ProSiteProfiles	Cytochrome c oxidase subunit Vb, zinc binding domain profile.	41	141	IPR002124	GO:0005740\|GO:0005751\|GO:0006123
	Gso15g0103	152	PANTHER	CYTOCHROME C OXIDASE SUBUNIT 5B	1	152	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso15g0103	Gso-Chr15	823980	827124	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso15g0103	K02265		-	gmx:100801050	285.804

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gso15g0103	15	823980	827124	Gso11g3700	11	52662667	52665023	GST
	Gso15g0103	15	823980	827124	Gso8g1744	8	17051746	17055725	PCT
	Gso8g1744	8	17051746	17055725	Gso15g0103	15	823980	827124	PCT