Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1726 ATGGAGTTAATTTCGGGATTGCCAGAGGATGTTGCCCGAGACTGTTTAATTCGGGTTTCGTATCAACAGTTTCCAACGGTGGCGTCAGTGTGCAAACTCTGGAAATCGGAGATTCACGCGCCGGAGTTCCATCGTCAACGGCGTAGCACAAAGCACACCCAGAAGGTCATAGCGATGGTTCAAGCACACGTAGAACCGGGAACCGGTTCGACCAAGCGCGTGAAGAACCCGGTTTACTGGCTCAGCGTGTTCGAACCGGAAACGGGTAACTGGAGTAAGATTCCACCACCACCGGAATTTTATTCGGGGCTACCCATGTTCTGTCAGTTAGTGAGTGTCGGGTACGATCTGGTTGTGTTGGGTGGGTTGGACCCGAATTCGTGGGAAGCATCAAATTCTGTTTTTGTTTATAATTTCTTGTCGGCCAAGTGGCGCCGCGGGACGGACATGCCGGGTGGGCGCCGCATGTTCTTCTCGTGCGCGTCAGATTCCGAGGGGACAGTTTTTGTCGCCGGCGGACACGACAATGAGAAGAACGCGCTGCGGTCTGCGCTGGCCTACGATGTTTCCTCGGACCGGTGGGTTGTGCTTCCCGACATGGCGGCGGAGCGCGACGAGTGCAAGGGCGTTTTCAGCCGCGGGAGGTTTGTCGCCGTCGGCGGTTACCCGACGGAGACGCAGGGAAGGTTCGTGAAGAGTGCGGAGGCGTTCGATCCGGCCACGAGGAGCTGGAGTGAAGTGAAGGACTTCTTGGATTGCGCCACGTGTCCGAGAACCTTCGTGGACGGTGGCGATGACGAGGGGGTGTTCTTGTGCAGCGGCGAGGACTTGATTGCCCTTCGTGGGGACACGTGGCAGAAGATGGCGTCCCTCCCGGGGGAGATACGAAACGTGTCGTACGTTGGGGCGTTTGATGGGACGCTGGTGTTGATTGGATCCAGCGGCTATGGTGAAGTCCACGTGGCTTATGCGTTCGATGTGAAGAGTTGCAATGGGAGGAAACTGGAGAGCCCAGAGGGGTTCAGGGGCCATGTCCAAACTGGGTGTGTTTTGGAGATTTAG 1062 0.5687 MELISGLPEDVARDCLIRVSYQQFPTVASVCKLWKSEIHAPEFHRQRRSTKHTQKVIAMVQAHVEPGTGSTKRVKNPVYWLSVFEPETGNWSKIPPPPEFYSGLPMFCQLVSVGYDLVVLGGLDPNSWEASNSVFVYNFLSAKWRRGTDMPGGRRMFFSCASDSEGTVFVAGGHDNEKNALRSALAYDVSSDRWVVLPDMAAERDECKGVFSRGRFVAVGGYPTETQGRFVKSAEAFDPATRSWSEVKDFLDCATCPRTFVDGGDDEGVFLCSGEDLIALRGDTWQKMASLPGEIRNVSYVGAFDGTLVLIGSSGYGEVHVAYAFDVKSCNGRKLESPEGFRGHVQTGCVLEI* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1726 353 SMART kelc_smart 215 258 IPR006652 GO:0005515
Gso8g1726 353 SMART kelc_smart 116 164 IPR006652 GO:0005515
Gso8g1726 353 SMART kelc_smart 167 214 IPR006652 GO:0005515
Gso8g1726 353 Gene3D - 44 339 IPR015915 GO:0005515
Gso8g1726 353 SUPERFAMILY F-box domain 3 53 IPR036047 GO:0005515
Gso8g1726 353 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN 1 353 - -
Gso8g1726 353 PANTHER OS02G0208700 PROTEIN 1 353 IPR044595 GO:0080037|GO:2000762
Gso8g1726 353 Pfam Kelch motif 166 200 IPR006652 GO:0005515
Gso8g1726 353 Pfam Kelch motif 105 154 - -
Gso8g1726 353 SUPERFAMILY Kelch motif 76 327 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1726 Gso-Chr8 16844253 16845750 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1726 7 220 Miscellaneous Gene Families AT4G33900 26.180 1.43e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1726 - - gmx:100819561 733.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0123 15 1081672 1083196 Gso8g1726 8 16844253 16845750 PCT
Gso11g3681 11 52444831 52446541 Gso8g1726 8 16844253 16845750 PCT
Gso8g1726 8 16844253 16845750 Gso15g0123 15 1081672 1083196 PCT
Gso8g1726 8 16844253 16845750 Gso11g3681 11 52444831 52446541 PCT