Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3681 ATGGAGTTGATTTCAGGTCTACCAGAGGACGTAGCCCGAGACTGCTTAATTAGGATTCCCTACGAGCAATTCCCGGCGGTTGCTTCCGTCTGCAAAGGCTGGAACACGGAGATTCACTCGCCGGACTTTCACCGGCGTAGAAGAACCACCAAACAAGCCCAGGAAATCCTCGTCACGGTTCAATCCAATATAGACTCCGAAAAAACTCGAACCGGTTTGCTCGCGAAGTCCACCACGAACCCGGTTTACCGGCTCAGCGTATTCGAACCGAAAACGGGTTCATGGAGCGAGTTACCCTTGGGACCCGAACTCGCCTTCGGGTTACCCATGTTCTGTCGGATAGCGGGTGTCGGGTTCGACCTTGTCGTAATGGGCGGGTGGGACCCAGACTCGTGGAAAGCGTCGAATTCGGTTTTTATCTACAACTTCCTGTCGGCCAAGTGGCGGCGTGGGGCCGACATGCCGGGTGGGCCCCGCACGTTTTTCGCATGCGCGTCGGATCAGAACAATCAAACGGTGTACGTCGCGGGCGGACACGACGAGGAGAAGAACGCGCTGAGGTCAGTGCTTGCGTATGACGTGGCCAGAGACCTGTGGGTCCCTCTACCCGACATGTCACGTGAGCGCGACGAGTGCAAGGCCGTGTTCCGCCGTGGCGCGCTTTGCGTCGTCGGAGGGTACTGCACAGAGATGCAGGGCAGGTTCGAGCGGAGCGCGGAGGTTTTCGACGTTGCCACGTGGAAGTGGGGCCCGGTGGAGGAGGAGTTCATGGATGCCGCCGCGTGTCCACGCACGTTCGTCGACGGCGGGGATGGTGCGATGTACATGTGCTGCGGCGGTGACGTGGTTGCGTTGCAAGGGGACACGTGGCGGAATGTGGCGAAGGTGCCGGGTGAAATACGGAACGTTGCGTGCGTGGGAGTGTGGGAAGGGGCAATGCTGGTCATTGGATCGAGTGGGTTTGGGGAACCGCATGTGGGCTTTGTGTTGGATCTGAAAAGTTGGGCTTGGACTAAACTTGTGAGCCCAGAGGAGTACACTGGTCACGTTCAATCTGGTTGCCTTTTGGAAATTTAG 1077 0.5812 MELISGLPEDVARDCLIRIPYEQFPAVASVCKGWNTEIHSPDFHRRRRTTKQAQEILVTVQSNIDSEKTRTGLLAKSTTNPVYRLSVFEPKTGSWSELPLGPELAFGLPMFCRIAGVGFDLVVMGGWDPDSWKASNSVFIYNFLSAKWRRGADMPGGPRTFFACASDQNNQTVYVAGGHDEEKNALRSVLAYDVARDLWVPLPDMSRERDECKAVFRRGALCVVGGYCTEMQGRFERSAEVFDVATWKWGPVEEEFMDAAACPRTFVDGGDGAMYMCCGGDVVALQGDTWRNVAKVPGEIRNVACVGVWEGAMLVIGSSGFGEPHVGFVLDLKSWAWTKLVSPEEYTGHVQSGCLLEI* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3681 358 SUPERFAMILY F-box domain 3 50 IPR036047 GO:0005515
Gso11g3681 358 PANTHER OS02G0208700 PROTEIN 1 358 IPR044595 GO:0080037|GO:2000762
Gso11g3681 358 Pfam F-box domain 4 45 IPR001810 GO:0005515
Gso11g3681 358 Gene3D - 44 351 IPR015915 GO:0005515
Gso11g3681 358 Pfam Kelch motif 170 206 IPR006652 GO:0005515
Gso11g3681 358 Pfam Kelch motif 120 155 IPR006652 GO:0005515
Gso11g3681 358 SMART kelc_smart 120 168 IPR006652 GO:0005515
Gso11g3681 358 SMART kelc_smart 172 219 IPR006652 GO:0005515
Gso11g3681 358 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN 1 358 - -
Gso11g3681 358 SUPERFAMILY Kelch motif 79 340 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3681 Gso-Chr11 52444831 52446541 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3681 - - gmx:100817910 751.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0123 15 1081672 1083196 Gso11g3681 11 52444831 52446541 GST
Gso11g3681 11 52444831 52446541 Gso8g1726 8 16844253 16845750 PCT
Gso8g1726 8 16844253 16845750 Gso11g3681 11 52444831 52446541 PCT