Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0123 ATGGAGTTGATTTCAGGTCTACCAGAGGACGTAGCCCGAGACTGTTTGATTAGGGTTCCCTATGATCAATTCCCGGCGGTTGCTTCAGTCTGCAAAGGCTGGAGCGCGGAGATTCACTCGCCGGACTTTCACCGTCGGAGGAGAACCACCAAACAAGCCCAGAAAATCCTCGTCACGGTTCAGTCCAAGATAGACTCCGATAAAACCCGAACCGGTTTGCTCGCGAAGTCCACCACCAACCCGGTTTACCGGCTCAGCGTATTCGAACCGAAGACGGGTTCATGGTGCGAGTTACCCCTGGGACCCGAACTCGCTTTCGGGCTCCCCATGTTCTGTCAGATAGCGGGTGTCGGGTTCGACCTTGTCGTAATGGGCGGGTGGGACCCAGATTCGTGGAAAGCGTCGAATTCGGTTTTTATATACAACTTCCTGTCGGCCAAATGGCGCCGTGGGGCCGACATGCCGGGTAGGCCCCGCACGTTTTTCGCGTGCGCGTCGGATCAGAATCGCACGGTTTACGTCGCGGGCGGACACGACGAGGAGAAGAACGCGCTGAGGTCAGCGCTTGCGTATGACGTGGCCATGGACGTGTGGGTCCCGCTCCCCGACATGTCGCGTGAGCGAGACGAGTGCAAGGCCGTGTTCCGACGCGGCGGCGCGCTCTGCGTCGTCGGAGGGTACTGCACGGAGATGCAGGGGCGCTTCGAGCGGAGCGCGGAGGTTTTCGACGTTGCCAAGTGGAAGTGGGGCCCAGTGGAGGAGGAGTTCTTAGATGCCGCCGCGTGTCCGCGCACGTGCGTCGACGGCGCGGATGGTGCGGAGGGGAGAATGTTCATGTGCCGGGGTGGTGACGTGGTGGCGCTGCACGGGGACACGTGGCGGAATGTGGCGAAGGTGCCGGGTGAGATACGGAACGTTGCGTGCGTGGGAGTGTGGGAAGGGTTGATGCTGGTAATTGGATCGAGTGGGTTTGGGGAACCACATATGGGCTTTGTGTTGGATCTGAAAAATCGGGCTTGGACTAAACTTGCCAGCCCAGAGGACTACACTGGTCACGTGCAATCTGGTTGCCTTCTCCAAATTTAG 1086 0.5939 MELISGLPEDVARDCLIRVPYDQFPAVASVCKGWSAEIHSPDFHRRRRTTKQAQKILVTVQSKIDSDKTRTGLLAKSTTNPVYRLSVFEPKTGSWCELPLGPELAFGLPMFCQIAGVGFDLVVMGGWDPDSWKASNSVFIYNFLSAKWRRGADMPGRPRTFFACASDQNRTVYVAGGHDEEKNALRSALAYDVAMDVWVPLPDMSRERDECKAVFRRGGALCVVGGYCTEMQGRFERSAEVFDVAKWKWGPVEEEFLDAAACPRTCVDGADGAEGRMFMCRGGDVVALHGDTWRNVAKVPGEIRNVACVGVWEGLMLVIGSSGFGEPHMGFVLDLKNRAWTKLASPEDYTGHVQSGCLLQI* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0123 361 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN 1 361 - -
Gso15g0123 361 Gene3D - 44 354 IPR015915 GO:0005515
Gso15g0123 361 SUPERFAMILY Kelch motif 79 345 IPR015915 GO:0005515
Gso15g0123 361 Pfam F-box domain 4 45 IPR001810 GO:0005515
Gso15g0123 361 PANTHER OS02G0208700 PROTEIN 1 361 IPR044595 GO:0080037|GO:2000762
Gso15g0123 361 SMART kelc_smart 120 168 IPR006652 GO:0005515
Gso15g0123 361 SMART kelc_smart 171 218 IPR006652 GO:0005515
Gso15g0123 361 SUPERFAMILY F-box domain 3 53 IPR036047 GO:0005515
Gso15g0123 361 Pfam Kelch motif 159 205 IPR006652 GO:0005515
Gso15g0123 361 Pfam Kelch motif 121 155 IPR006652 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0123 Gso-Chr15 1081672 1083196 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0123 - - gmx:100786398 754.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0123 15 1081672 1083196 Gso11g3681 11 52444831 52446541 GST
Gso15g0123 15 1081672 1083196 Gso8g1726 8 16844253 16845750 PCT
Gso8g1726 8 16844253 16845750 Gso15g0123 15 1081672 1083196 PCT