Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1672 ATGGATGGGAATAATTTCAGCAGAAGCATAAGCAGGAGCATAAGCAGGTCAAGTTGGAAAATGGAGGAAGTGTTTGCGAGTGGAAGGTATTCTCGCAGGACTTCACATGTGGATGAGGATGAGGAGGCTCTCAAATGGGCTGCCATAGAGAAACTTCCCACCTATGATAGGCTAAGAACAAGTATCATCCAAACCTTTGCCGAGGGCGATCAAGCCGGTGTGCACAAGGAAATCGATGTTCGGAAGTTAGATGTGAATGATAGGCAACAAATCATTGACAAGATTTTCAAGGTTGCTGAAGAAGATAATGAAAAGTTCCTCAAGAAGTTCAGAAACAGAATTGACAAGGTTGGAATTCGACTTCCAACAGTAGAAGTGAGGTTCCAAAATTTGACTGTTGAGGCAGATTCCTATGTCGGCAGCAGAGCTCTACCAACCCTACCAAATGTTGCACTGAACCTTCTTGAATCAGCTCTTGGCATTTTTGGCATTAGTACAGCTAAGAGAACAAAGCTCACAATTCTTAAGAATACCTCTGGCATTGTTAAACCATCAAGGATGGCCCTTCTACTAGGACCCCCGTCTTCAGGGAAAACGACCCTTTTGTTGGCATTGGCTGGAAAATTGGACTCCGAATTGAGGGTAAAAGGAGAAATCACATACAATGGACATAAACTTAATGAGTTTGAGCCTAGAAAAACTTCAGCATACATTAGCCAAAATGATGTTCATGTTGGAGAAATGACTGTAAAAGAAACACTGGATTTCTCAGCTAGATGTCAAGGAGTTGGGACTCGATATGACCTATTAACCGAGCTTGCTAGAAGGGAGAAGGAAGCCGGCATATTCCCAGAGGCAGATGTTGACCTTTTCATGAAGGCAACTGCTATGGAAGGGACAGAAAGCAGTCTCATTACCGACTACACACTCAAAATATTGGGGCTTGATATTTGTAAGGATACCATAGTGGGTGATGAAATGCACAGAGGGGTATCCGGTGGCCAAAAGAAGCGTGTCACTACAGGAGAGATGATTGTAGGGCCCACAAAAACACTATTCATGGATGAAATATCAACGGGTCTTGATAGCTCAACAACATATCAGATTGTGAAGTGCTTGCAGCAGATTGTGCACCTTAATGAAGGAACTATCTTAATGTCCCTTCTCCAACCTGCTCCTGAGACCTTCAATCTCTTTGATGACATCATCCTCATATCAGAGGGCCAGATTGTGTATCAAGGCCCTCGTGAGCACATTGTGGAATTCTTTGAATCCTGTGGGTTCCGCTGTCCCGAAAGAAAGGGAACCGCTGATTTCTTGCAAGAGGTTACCTCAAGGAAGGACCAAGAGCAGTATTGGGCAGACAAAAACATGCCATACCGTTATGTTACAGTGACTGAATTTGCAAACAAGTTCAAGAGATTCCATGTTGGAATAAGGCTTGAGAGCGAGTTGTCTGTGGCATTTGACAAGTCAAGTGCACACAAAGCAGCTCTTGTATATAGTAAAAACTCTGTGCCAACAATGGACCTTTTCAAAGCATGTTGGGACAAGGAGTGGCTTCTGATCAAGAGGAACTCCTTCGTCTACATATTCAAGACAGCCCAAATAATCTTCATTGCCTTCATAGCCGCGACACTGTTCTTGAGGACTGAAATGCACCGGAAAAATGAAGATGATGCTGCACTCTACATTGGTGCAATTTTGTTCACCATGATCATGAACATGTTCAATGGTTTTGCTGAGCTAGCACTCACAATTGGAAGGCTTCCCGTGTTTTACAAGCACAGAGACCACCTTTTCCACCCTGCTTGGACTTACACCCTCCCCAATTTCTTGTTGCGTATTCCCATTTCTGTGTTTGAGTCTCTTGTTTGGGTTGGTGTCACCTACTACATCATAGGATTTGCTCCTGATGCCAGCAGGTTCTTCAAGCAATTGTTGTTGGTGTTTCTGATCCAACAAATGGCAGCTGGGATGTTTAGGGTCATTTCTGGAGTGTGCAGGACAATGATTATAGCTAACACTGGAGGAGCCCTCATGCTCCTTCTTGTTTTCCTACTTGGAGGCTTCATCCTTCCAAAACGTGAAATTCCTGATTGGTGGGTGTGGGCTTACTGGGTGTCACCATTGACATACGGCTTTAATGCCTTGTCTGTGAATGAAATGTTAGCTCCAAGGTGGATGCATCCACAGACTTCTTCTGATAAAAATACCACATTGGGTCTATCAGTACTAAGGAACTTTGATGTTTATGCTAAAAAAGATTGGTACTGGATTGGAGCTGCTGCTCTTCTTGGTTTCACAGTTCTGTACAACGTTCTCTTCACCCTTGCGCTTATGTACCTTAACCCTCTTGGAAAGAAACAAGCAATTATTTCTGAGGAAGATGCAAGTGAAATGGAGTCTGGAGGAGACACCAATGAAGAACCCAGACTTGTAAGGCCCCCATCAAACAGAGAATCAATGCTTCGATCATTATCTACTGCTGATGGAAACAATTCAAGAGAAGTGGCAATGCAGCGAATGGGTAGCCAAGCTACCAGTGGATTAAGAAAAGTTGAGTCGGCAAACGATTCAGCTACTGGAGTTGCCCCCAAAAAAGGAATGATTTTACCTTTCCAACCACTTGCAATGTCCTTTGACACTGTTAATTACTACGTCGACATGCCTGCAGAAATGAGAGATCAAGGAGTGACAGAAGATAGGCTACAACTGCTTAGGGGAGTAACTAGCTCCTTTAGGCCTGGAGTCCTAACTGCACTAATGGGAGTTAGTGGCGCTGGGAAGACAACTTTAATGGATGTTTTAGCAGGAAGAAAGACGGGTGGCTACATTGAAGGAGATATTAGAATCTCGGGGTTCCCTAAGAACCAAGAAACCTTTGCAAGAGTCTCTGGTTACTGTGAACAAACTGATATTCATTCACCCCAAGTTACTATTAGAGAATCTTTGCTTTACTCAGCCTTCCTCCGGTTACCAAAAGAAGTTAGCAAGGAGGAAAAAATACAATTTGTGGACCAAGTGATGGATTTGGTAGAGTTAGATAATCTCAAGGATGCTATAGTGGGGCTTCCAGGAGTTACTGGGTTGTCAACCGAACAACGAAAGAGGCTGACCATCGCTGTTGAGCTTGTTGCTAATCCTTCAATTATTTTCATGGATGAACCCACTTCTGGTCTTGATGCAAGAGCAGCAGCTATTGTTATGAGGACTGTGAGAAACACTGTGGACACTGGAAGAACAGTTGTCTGCACAATTCACCAGCCTAGCATTGATATCTTTGAAGCCTTTGATGAGCTTTTGTTGATGAAAAGAGGAGGACAAGTGATCTACTCAGGACCATTAGGCCGAAATTCCCACAAGATTACGGAATACTTTGAGGCAATTCCAGGGGTCCCAAAAATTAAAGAGATGTACAACCCAGCAACATGGATGCTAGAAGTGAGTTCTGTAGCAGCTGAAGTTCGTCTTGGAATGGACTTTGCTGAATACTACAAAACATCATCTTTATTCCAGCGAAACAAAGCTCTTGTAAAGGAGTTAAGCACACCCCCGCCTGGAGCTACTGATTTGTATTTCCCCACCAAGTATTCTCAATCCACATTGGGGCAATTTAAATCCTGTTTTTGGAAGCAGTGGCTGACATACTGGAGGAGTCCAGATTATAATCTCGTCAGATATTTTTTCACCTTGGCTTGTGCCCTCATGATAGGGACAGTATTTTGGAGAATTGGCAAAAACAGGGAGAGCTCAGCTGATCTGACAATGATTATAGGAGCAATGTATGCTGCTGTTATTTTTGTTGGGATTAACAATTGTCAAACTGTTCAACCAATTGTAGCCGTTGAAAGAACAGTGTTCTATCGAGAAAGAGCTGCTGGAATGTATGCTCCTTTGCCTTATGCCTTAGCACAGGTCTTTTGCGAAATACCATATGTGTTTTTCCAAACTGTTTATTACTCACTCATAGTGTATGCAATGGTGAGCTTTGAATGGAAAGTGGAGAAGTTCTTTTGGTTCTTCTTTGTCAGCTTCTTCTCTTTCTTGTACTTCACATATTATGGAATGATGACTGTGTCCATCACACCAAACCACCAAGTGGCATCAATCTTTGCAGCAGCATTCTATGGACTCTTTAATCTCTTCTCTGGTTTCTTTATCCCAAGACCGAAAATTCCTAAATGGTGGGTGTGGTATTACTGGATTTGTCCAGTGGCATGGACAGTGTATGGATTAATTGTCTCTCAATATAGAGATATAGAGGACCCACTTTTTGTGCCTGGGAGTACTACTCAAAATTTCACTGTCAAAGGATATATTGAAGACCACTACGGGTTCAAATCCGACTTCATGGGTCCAGTTGCTGCAGTTTTGGTAGCTTTCACTGTCTTTTTTGCCTTTGTATTTTCCTTCTGCATCAAGGCACTGAACTTCCAAACAAGATAA 4449 0.4293 MDGNNFSRSISRSISRSSWKMEEVFASGRYSRRTSHVDEDEEALKWAAIEKLPTYDRLRTSIIQTFAEGDQAGVHKEIDVRKLDVNDRQQIIDKIFKVAEEDNEKFLKKFRNRIDKVGIRLPTVEVRFQNLTVEADSYVGSRALPTLPNVALNLLESALGIFGISTAKRTKLTILKNTSGIVKPSRMALLLGPPSSGKTTLLLALAGKLDSELRVKGEITYNGHKLNEFEPRKTSAYISQNDVHVGEMTVKETLDFSARCQGVGTRYDLLTELARREKEAGIFPEADVDLFMKATAMEGTESSLITDYTLKILGLDICKDTIVGDEMHRGVSGGQKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHLNEGTILMSLLQPAPETFNLFDDIILISEGQIVYQGPREHIVEFFESCGFRCPERKGTADFLQEVTSRKDQEQYWADKNMPYRYVTVTEFANKFKRFHVGIRLESELSVAFDKSSAHKAALVYSKNSVPTMDLFKACWDKEWLLIKRNSFVYIFKTAQIIFIAFIAATLFLRTEMHRKNEDDAALYIGAILFTMIMNMFNGFAELALTIGRLPVFYKHRDHLFHPAWTYTLPNFLLRIPISVFESLVWVGVTYYIIGFAPDASRFFKQLLLVFLIQQMAAGMFRVISGVCRTMIIANTGGALMLLLVFLLGGFILPKREIPDWWVWAYWVSPLTYGFNALSVNEMLAPRWMHPQTSSDKNTTLGLSVLRNFDVYAKKDWYWIGAAALLGFTVLYNVLFTLALMYLNPLGKKQAIISEEDASEMESGGDTNEEPRLVRPPSNRESMLRSLSTADGNNSREVAMQRMGSQATSGLRKVESANDSATGVAPKKGMILPFQPLAMSFDTVNYYVDMPAEMRDQGVTEDRLQLLRGVTSSFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKNQETFARVSGYCEQTDIHSPQVTIRESLLYSAFLRLPKEVSKEEKIQFVDQVMDLVELDNLKDAIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGPLGRNSHKITEYFEAIPGVPKIKEMYNPATWMLEVSSVAAEVRLGMDFAEYYKTSSLFQRNKALVKELSTPPPGATDLYFPTKYSQSTLGQFKSCFWKQWLTYWRSPDYNLVRYFFTLACALMIGTVFWRIGKNRESSADLTMIIGAMYAAVIFVGINNCQTVQPIVAVERTVFYRERAAGMYAPLPYALAQVFCEIPYVFFQTVYYSLIVYAMVSFEWKVEKFFWFFFVSFFSFLYFTYYGMMTVSITPNHQVASIFAAAFYGLFNLFSGFFIPRPKIPKWWVWYYWICPVAWTVYGLIVSQYRDIEDPLFVPGSTTQNFTVKGYIEDHYGFKSDFMGPVAAVLVAFTVFFAFVFSFCIKALNFQTR* 1483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1672 1482 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 10 1482 - -
Gso8g1672 1482 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 170 432 IPR027417 -
Gso8g1672 1482 SMART AAA_5 916 1108 IPR003593 -
Gso8g1672 1482 SMART AAA_5 184 416 IPR003593 -
Gso8g1672 1482 MobiDBLite consensus disorder prediction 797 836 - -
Gso8g1672 1482 CDD ABCG_PDR_domain2 876 1114 IPR034003 -
Gso8g1672 1482 Pfam Plant PDR ABC transporter associated 728 793 IPR013581 -
Gso8g1672 1482 Gene3D - 893 1128 IPR027417 -
Gso8g1672 1482 CDD ABCG_PDR_domain1 168 414 IPR034001 -
Gso8g1672 1482 MobiDBLite consensus disorder prediction 821 836 - -
Gso8g1672 1482 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 159 432 IPR003439 GO:0005524
Gso8g1672 1482 PANTHER ATP-BINDING CASSETTE TRANSPORTER 10 1482 - -
Gso8g1672 1482 Pfam ABC transporter 907 1059 IPR003439 GO:0005524
Gso8g1672 1482 Pfam ABC transporter 175 357 IPR003439 GO:0005524
Gso8g1672 1482 Gene3D - 162 472 IPR027417 -
Gso8g1672 1482 Pfam ABC-2 type transporter 511 722 IPR013525 GO:0016020|GO:0140359
Gso8g1672 1482 Pfam ABC-2 type transporter 1205 1418 IPR013525 GO:0016020|GO:0140359
Gso8g1672 1482 Pfam ABC-2 type transporter 1088 1148 IPR043926 GO:0140359
Gso8g1672 1482 Pfam ABC-2 type transporter 390 468 IPR043926 GO:0140359
Gso8g1672 1482 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 892 1131 IPR003439 GO:0005524
Gso8g1672 1482 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 895 1116 IPR027417 -
Gso8g1672 1482 Pfam ABC-transporter N-terminal 90 150 IPR029481 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1672 Gso-Chr8 16369730 16379248 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1672 K08711 - gmx:100798588 2872.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0134 7 1264140 1273283 Gso8g1672 8 16369730 16379248 GST
Gso15g0176 15 1478728 1489317 Gso8g1672 8 16369730 16379248 PCT
Gso11g3635 11 52048049 52059105 Gso8g1672 8 16369730 16379248 PCT
Gso8g1672 8 16369730 16379248 Gso15g0176 15 1478728 1489317 PCT
Gso8g1672 8 16369730 16379248 Gso11g3635 11 52048049 52059105 PCT