Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3635 ATGGAGAGTGGGAATTTAACCAGAAGCATAAGTAGGAGCTTAAGCAGGTCAAGTTGGAGAATGGAGGGTGTGTTTGCAAGTGGGAGATATTCTCGAAGGACTTCAAATGTTGATGAGGATGAAGAGGCTCTCAAGTGGGCTGCCATAGAGAGATTGCCAACCTATGACAGGCTAAGAACAAGTATCCTCCAAACATTTGTGGAGGCTGGTCATGATCATGCTGATGCTCGTCCAAGCACATTGCAACACAGGGAAGTTGATGTTCGAAAGTTGGATGTCAATGAAAGGCAAGAGTTTATTGACAGAATCTTCAAGGTAGCTGAAGAAGACAATGAAAAGTACTTGCGCAAATTCAGAAACAGACTTGATAAGGTTGGTATCCGACTCCCAACAGTAGAAGTGAGGTATCAAAATTTGACTGTAGAGGCTGATTGCTACATTGGCAGCAGAGCTCTGCCAACCTTACCAAACGTTGCATTGAACATTGCTGAATCAGCTCTTGGATTATGTGGGATTAGTACCGCAAAGAGGACAAAGCTCACAATTCTTAAAAATGTCTCCGGCATTATTAAGCCTTCAAGGATGGCCCTTTTGCTTGGTCCCCCTTCTTCAGGGAAAACAACCCTTTTGCTGGCCTTGGCTGGAAAATTGGACAATGATTTGAGGGTTAATGGAGAAATCTCCTACAACGGGCACAAGCCTAACGAGTTTGTCCCTAGAAAGACTTCAGCCTACATTAGCCAAAATGATGTGCATATAGGAGAAATGACCGTAAAAGAAACCCTTGATTTCTCAGCTAGATGCCAAGGAGTTGGAACGAGATATGACCTATTAGCCGAGCTAGCTCGAAGGGAAAAGGAAGCTGGAATATTTCCAGAGGCAGAACTTGACCTTTTCATGAAGGCTACTGCAATGGAAGGAACAGAAAGCAGTCTCATTACTGCCTATACACTCAAAATATTGGGGCTTGATATTTGCAAAGATACCATTGTGGGTGATGAAATGCAGAGAGGTGTATCTGGTGGCCAAAAGAAGCGTGTAACCACAGGGGAAATGATCGTTGGGCCCACAAAAACATTGTTCATGGATGAAATATCAACGGGACTTGATAGCTCCACAACATATCAAATTGTGAAATGCTTCCAACAAATTGTACACCTCACTGAAGCAACCATATTCATGTCCCTACTCCAACCTGCTCCAGAGACGTTCGATCTCTTTGATGATATCATCTTAATATCGGAGGGTCAGATTGTTTATCAGGGCCCACGTGAGCACATCGTTGAGTTCTTTGAATCTTGTGGCTTTAAATGTCCTGAAAGAAAGGGAACAGCAGATTTCTTACAGGAGGTTACTTCAAGGAAAGATCAAGAACAATATTGGGCAAATAGAAGCTTATCATACCGTTATGTCACAGTGAGCGAGTTTGCAAATAGATTCAAGCAATTTCATGTTGGAATAAAGCTTGAGAATGAGCTTTCTGTGCCATTTGATAAATCAAGGGGACATAGAGCGGCTCTTGTTTTCAAGAAATATACAGTGCCCACAATGGGACTTCTTAAAGCATGTTGGGACAAGGAATGGCTACTAATAAAGAGGAATGCTTTTGTCTATGTATTTAAGACAGGTCAAATAGTCATTATTGGTATCATAGCTGCAACTGTGTTCTTTAGGACCAATATGCATCAAAGGAATGAGGCTGATGCCGCAGTTTACATAGGCTCAATTTTGTTTACCATGATCATGAACATGTTCAATGGTTTTGCTGAGTTACCACTCACGATTGCAAGACTTCCTATATTCTACAAGCACAGAGACCACCTTTTCCATCCTCCTTGGACTTACACTCTCCCTAATTTCATCCTACGGATCCCCATTACTATGTTTGAGGCTATTGTTTGGGTACTTATCACATACTACACAATAGGATTAGCACCTGAAGCTAGCAGGTTCTTCAAGCACTTGTTGCTAGTTTTTCTTGTCCAGCAAATGGCAGCTGGGATGTTTAGGTTCATATCTGGAGTTTCTAGGACAATGATTATTGCTAACACTGGTGGATCCCTCATGCTCCTCCTTGTTTTTTTACTTGGAGGTTTCATCCTTCCTAAAAGTTCCATTCCAAATTGGTGGATATGGGGCTACTGGATATCACCACTAACATATGGATTCAATGCTTTTACTGTGAATGAATTATTTGCTCCAAGGTGGAGCAATTTGTCTTCAGATGGTAGAACCCCGATCGGTATAGCTACATTAAATAACTTCGATGTTTTTACTGAGAAACGATGGTACTGGATAGGTGCAGCTACTCTTTTGGGTTTCATTATCTTGTACAATGTTCTCTTCACCTTTGCACTTATGTACCTTAATCCTATTGGAAAAAAACAAGCAATTGTATCTGAAGAAGAAGCAAGTGAAATGGAAGCTGAAGGAGACTTTAGAAAAGATCCTAGACTTTTAAAGCCAGAGCCCAACAGAGAGATAGCCCTTCAATCATTATCTTCTACTGATGGGAACAACACACGAGAAGTGGCAATGCAACAAATGAGTAACCGAGGTAATCCTAGTGGAATAAGAAGTGTTGATTCAATGCATGAATCAGCCACTGGAGTTGCCCCTAAGAGAGGAATGGTTCTACCTTTTCAACCACTTGCAATGTCTTTTGATAGTGTTAATTATTATGTGGACATGCCTGCTGAAATGAAAGGGCAAGGAGTGACAGATGATAGGCTACAATTACTTAGGGAAGTTACTGGTGCCTTTAGGCCTGGAGTTTTAACTGCTTTAATGGGAGTTAGTGGAGCTGGAAAGACAACTTTGATGGATGTTTTAGCAGGGAGAAAGACAGGTGGCTACATTGAAGGAGATGTTAGAATATCTGGCTTCCCCAAGAACCAAGAAACATTTGCACGAATTTCTGGTTATTGTGAGCAAACTGATATCCATTCACCCCAAGTTACTGTTCGAGAATCTTTGATCTATTCTGCTTTCCTTCGATTGCCTATAGAGGTCAATAATGAGGAAAAAATGAAATTTGTTGACGAAGTAATGGAGTTGGTTGAGCTAAATAATCTCAAGGATGCTATAGTTGGGCTTCCAGGTGTTACAGGGTTGTCAACCGAACAAAGAAAAAGGCTAACAATTGCTGTTGAACTCGTCGCTAATCCGTCAATCATTTTCATGGATGAACCAACTTCAGGTCTCGATGCAAGAGCAGCAGCCATTGTAATGAGGACTGTGAGAAATACTGTTGACACTGGAAGAACAGTTGTATGCACAATTCACCAACCTAGTATCGATATCTTTGAAGCCTTTGACGAGTTGTTGTTGATGAAGAGAGGAGGACAAGTGATCTACTCAGGACCATTAGGAAGGAATTCACTTAGGATTATAGAATATTTTGAGGCAATCCCAGGGGTCCCAAAAATTAAGGATAAGTACAACCCAGCTACATGGATGTTAGAGGTTAGCTCTATAGCAGCTGAAGTTCGACTTCGAATGGATTTTGCTGAGCACTACAAATCATCATCTTTGTATCAGCGAAACAAAGCTCTAATAAGGGAGTTAAGTACTAGTCCTCCAGGAGTAAAAGATTTGTACTTCCCCACTCAATATTCTCAATCCACTTGGGAACAGTTCAAATCTTGTTTATGGAAACAACGGTTGACTTACTGGAGGAGTCCAGATTATAACCTTGTCAGGTTTTTCTTCACTTTAGCTGCAGCTTTCTTGGTGGGGACGGTATTTTGGAGGGTTGGCAAAAACAGGGGTAACTCAGGCGATCTGACTACTATTATAGGAGCATTGTATGGTTCAGTTTTTTTTGTAGGTGTTAACAATTGCCAAACTGTTCAACCAGTAGTAGCCGTTGAAAGAACGGTATTTTATCGAGAAAGAGCTGCTGGGATGTATTCTGCTTTGCCTTATGCCATTGCACAGGTTATTTCTGAAATACCATATCTATTTGTTCAAACTATATGTTTCTCATTCATAGTGTATGCTATGGTGAGCTTTGAATGGAAAGTAGCCAAGGTCCTTTGGTTTTTCTTTGTAAGTTTCTTTTCCTTCATGTACTTCACATACTATGGGATGATGACTGTTTCCATTACACCAAACCACCAAGTTGCATCAATCCTTGGAGCAGCATTCTACGGAATCTTCAATCTATTTTCTGGTTTTTTTATCCCAAGACCAAAAATTCCTAAATGGTGGGTTTGGTATTATTGGATTTGCCCAGTAGCGTGGACTGTGTATGGGTTAATTGTCTCACAATATGGAGATGTAGAGATAGAGATTAGTGTGCCTAGTGCGAATAACCAAACTATCAAGCATTATATTGAAGAACATTATGGGTTTAAACCAGACTTCATGGGACCAGTTGCCGCTGTTTTGGTCGCTTTTCCAGTCTTCTTTGCCTTTGTATTTGCCTTCGCAATCAAAACACTAAACTTCCAAACGAGATAA 4464 0.4088 MESGNLTRSISRSLSRSSWRMEGVFASGRYSRRTSNVDEDEEALKWAAIERLPTYDRLRTSILQTFVEAGHDHADARPSTLQHREVDVRKLDVNERQEFIDRIFKVAEEDNEKYLRKFRNRLDKVGIRLPTVEVRYQNLTVEADCYIGSRALPTLPNVALNIAESALGLCGISTAKRTKLTILKNVSGIIKPSRMALLLGPPSSGKTTLLLALAGKLDNDLRVNGEISYNGHKPNEFVPRKTSAYISQNDVHIGEMTVKETLDFSARCQGVGTRYDLLAELARREKEAGIFPEAELDLFMKATAMEGTESSLITAYTLKILGLDICKDTIVGDEMQRGVSGGQKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCFQQIVHLTEATIFMSLLQPAPETFDLFDDIILISEGQIVYQGPREHIVEFFESCGFKCPERKGTADFLQEVTSRKDQEQYWANRSLSYRYVTVSEFANRFKQFHVGIKLENELSVPFDKSRGHRAALVFKKYTVPTMGLLKACWDKEWLLIKRNAFVYVFKTGQIVIIGIIAATVFFRTNMHQRNEADAAVYIGSILFTMIMNMFNGFAELPLTIARLPIFYKHRDHLFHPPWTYTLPNFILRIPITMFEAIVWVLITYYTIGLAPEASRFFKHLLLVFLVQQMAAGMFRFISGVSRTMIIANTGGSLMLLLVFLLGGFILPKSSIPNWWIWGYWISPLTYGFNAFTVNELFAPRWSNLSSDGRTPIGIATLNNFDVFTEKRWYWIGAATLLGFIILYNVLFTFALMYLNPIGKKQAIVSEEEASEMEAEGDFRKDPRLLKPEPNREIALQSLSSTDGNNTREVAMQQMSNRGNPSGIRSVDSMHESATGVAPKRGMVLPFQPLAMSFDSVNYYVDMPAEMKGQGVTDDRLQLLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDVRISGFPKNQETFARISGYCEQTDIHSPQVTVRESLIYSAFLRLPIEVNNEEKMKFVDEVMELVELNNLKDAIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGPLGRNSLRIIEYFEAIPGVPKIKDKYNPATWMLEVSSIAAEVRLRMDFAEHYKSSSLYQRNKALIRELSTSPPGVKDLYFPTQYSQSTWEQFKSCLWKQRLTYWRSPDYNLVRFFFTLAAAFLVGTVFWRVGKNRGNSGDLTTIIGALYGSVFFVGVNNCQTVQPVVAVERTVFYRERAAGMYSALPYAIAQVISEIPYLFVQTICFSFIVYAMVSFEWKVAKVLWFFFVSFFSFMYFTYYGMMTVSITPNHQVASILGAAFYGIFNLFSGFFIPRPKIPKWWVWYYWICPVAWTVYGLIVSQYGDVEIEISVPSANNQTIKHYIEEHYGFKPDFMGPVAAVLVAFPVFFAFVFAFAIKTLNFQTR* 1488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3635 1487 Gene3D - 900 1128 IPR027417 -
Gso11g3635 1487 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 10 1487 - -
Gso11g3635 1487 Pfam ABC-2 type transporter 1211 1425 IPR013525 GO:0016020|GO:0140359
Gso11g3635 1487 Pfam ABC-2 type transporter 520 731 IPR013525 GO:0016020|GO:0140359
Gso11g3635 1487 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 178 440 IPR027417 -
Gso11g3635 1487 CDD ABCG_PDR_domain1 176 422 IPR034001 -
Gso11g3635 1487 Pfam ABC-transporter N-terminal 97 158 IPR029481 -
Gso11g3635 1487 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 167 440 IPR003439 GO:0005524
Gso11g3635 1487 PANTHER ATP-BINDING CASSETTE TRANSPORTER 10 1487 - -
Gso11g3635 1487 Gene3D - 170 479 IPR027417 -
Gso11g3635 1487 Pfam Plant PDR ABC transporter associated 736 799 IPR013581 -
Gso11g3635 1487 CDD ABCG_PDR_domain2 883 1121 IPR034003 -
Gso11g3635 1487 Pfam ABC-2 type transporter 398 451 IPR043926 GO:0140359
Gso11g3635 1487 Pfam ABC-2 type transporter 1095 1156 IPR043926 GO:0140359
Gso11g3635 1487 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 905 1122 IPR027417 -
Gso11g3635 1487 Pfam ABC transporter 183 365 IPR003439 GO:0005524
Gso11g3635 1487 Pfam ABC transporter 914 1066 IPR003439 GO:0005524
Gso11g3635 1487 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 886 1138 IPR003439 GO:0005524
Gso11g3635 1487 SMART AAA_5 192 417 IPR003593 -
Gso11g3635 1487 SMART AAA_5 923 1115 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3635 Gso-Chr11 52048049 52059105 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3635 K08711 - gmx:100801386 2899.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0176 15 1478728 1489317 Gso11g3635 11 52048049 52059105 GST
Gso11g3635 11 52048049 52059105 Gso7g0134 7 1264140 1273283 PCT
Gso11g3635 11 52048049 52059105 Gso8g1672 8 16369730 16379248 PCT
Gso7g0134 7 1264140 1273283 Gso11g3635 11 52048049 52059105 PCT
Gso8g1672 8 16369730 16379248 Gso11g3635 11 52048049 52059105 PCT