Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0176 ATGGAGAGTGGGAATTTAACCAGAAGCATAAGTAGGAGCTTAAGCAGGTCAAGTTGGAGAATGGAGGGTGTGTTTGCGAGTGGGAGATATTCTCGAAGAACTTCAAATGTTGATGAGGATGAAGAGGCTCTCAAGTGGGCTGCCATAGAGAGATTGCCAACCTATGACAGGCTAAGAACAAGTATCCTCCAAACATTTGCGGAGGCTGATAATGCTGATGCTCGTCCAAGCACATTGCAACACAGGGAAGTTGATGTTCGAAAGTTAGATGTCAATGAAAGGCAAGAGTTTATTGATAGAATCTTCAAGGTTGCTGAAGAAGACAATGAAAAATACTTGCGCAAGTTCAGAAACAGACTGGATAAGGTTGGTATCAGACTCCCAACAGTAGAAGTGAGGTATCAAAATTTGATTGTGGAAGCTGATTGCTACATTGGCAGCAGAGCTCTGCCAACCTTACCAAACGTTGCATTGAACATTGCTGAATCAGCTCTTGGCTTATGTGGGATTAGTACCGCAAAGAGGACAAAGCTCACAATTCTTAAAAATGTCACCGGCATTATTAAGCCTTCTAGGATGGCCCTTTTGCTTGGTCCCCCTTCTTCAGGGAAAACAACCCTTTTGCTGGCATTGGCTGGAAAATTGGACAATGATTTGAGGGTAAATGGAGAAATCTCCTACAACGGGTACAAGCTTAACGAGTTTGTCCCTAGAAAGACTTCAGCCTACATTAGCCAAAACGATGTACATATTGGAGAAATGACCGTAAAAGAAACCCTCGATTTCTCAGCTAGATGTCAAGGAGTTGGAACAAGATATGACCTATTATCTGAGCTAGCTCGAAGGGAAAAGGAAGCTGGAATATTTCCAGAGGCAGAACTTGACCTTTTCATGAAGGCTACTGCAATGGAAGGAACAGAAAGCAGTCTCATTACTGACTATACACTCAAAATATTGGGGCTTGATATTTGCAAAGATACCATTGTGGGTGATGAAATGCAGAGAGGTGTATCTGGTGGCCAAAAGAAGCGTGTAACCACAGGGGAAATGATCGTTGGACCTACAAAAACATTATTCATGGATGAAATATCAACGGGTCTTGATAGCTCCACAACATATCAAATAGTGAAATGCTTCCAACAAATTGTACACCTCACAGAAGCAACCATATTCATGTCCCTACTCCAACCTGCTCCAGAGACGTTCGATCTCTTTGATGATATCATCTTAATATCGGAGGGTCAGATTGTTTATCAGGGCCCACGTGAGCACATCGTTGAGTTCTTTGAATCTTGTGGCTTTAGATGTCCTGAAAGAAAGGGAACCGCTGATTTTTTACAGGAGGTTACTTCAAGGAAAGATCAAGAACAATATTGGGCAAATAGAAGCTTACCATACCGGTATATTACAGTGAGCGAGTTTGCAAATAGATTCAAGCAATTTCATGTTGGAATGCAGCTTGAGAATGAGCTTTCTGTGCCATATGATAAATCAAGGGGACATAGAGCAGCTCTTGTTTTCAAGAAATATACAGTGCCCACAATGGGACTTCTTAAAGCATGCTGGGACAAGGAATGGCTACTAATAAAGAGGAATGCTTTTGTCTATGTATTTAAGACAGGTCAAATAGTCATTATTGGTATCATAGCTGCAACTGTGTTCTTTAGGACCAATATGCATCAAAGGAACGAGGCTGATGCAGCAGTTTACATAGGTTCAATTTTGTTTACCATGATCATGAACATGTTCAATGGTTTTGCTGAGTTACCACTCACGATTGCAAGACTTCCTATATTCTACAAGCACAGAGACCACCTTTTCCATCCTCCTTGGACTTACACCCTCCCTAATTTCATCCTACGGATCCCCATTACTATGTTTGAGGCTATTGTTTGGGTACTTATCACATACTACACAATAGGATTAGCACCTGAAGCTAGCAGGTTCTTCAAGCACTTGTTGCTAGTTTTTCTTGTCCAGCAAATGGCAGCTGGGATGTTTAGGTTCATATCTGGAGTTTCTAGGACAATGATTATTGCTAACACTGGTGGATCCCTCATGCTCCTTCTTGTTTTTTTACTTGGAGGTTTCATCCTTCCTAAAAGTTCCATTCCAAATTGGTGGATATGGGGCTACTGGATATCACCACTAACATATGGATACAATGCTTTTACTGTGAATGAATTATTTGCTCCAAGGTGGAGCAAACCGTCTTCAGATGGTAGAACCCCGATCGGTATAGCTACGTTAAATAACTTTGATGTTTTTACTGAGAAACGATGGTACTGGATAGGTGTAGCTGCTCTTGTGGGTTTCATTATCTTGTACAATGTTCTCTTCACCTTTGCACTTATGTACCTTGATCCTATTGGAAAAAAACAAGCAATTATATCTGAAGAAGAAGCAAGTGAAATGGAAGGTGAAGGAAACTTTAGTGAAGATCCTAGACTTTTAAAGCCAGAGCCCAACAGAGAGATAGCCCTTCAATCATTATCTTCTACTGATGGAAACAACACACGAGAAGTGGCAATGCAACAAATGGGTAGCCGAGGTAATCCTAGTGGAATAAGAAGTGTTGATTCAATGCATGAATCAGCCACTGGAGTTGCCCCTAAGAGAGGAATGGTTCTACCTTTTCAACCACTTGCAATGTCTTTTGATAGTGTTAATTATTATGTGGACATGCCTGCTGAAATGAAAGGGCAAGGAGTGACAGATGATAGGCTACAATTACTTAGGGAAGTTACTGGTGCCTTTAGGCCAGGAGTTTTGACTGCTTTAATGGGAGTTAGTGGAGCTGGAAAGACAACTTTGATGGATGTTTTAGCAGGGAGAAAGACAGGTGGCTACATTGAAGGAGATGTTAGAATATCTGGCTTCCCCAAGAACCAAGAAACATTTGCACGAATTTCTGGCTATTGTGAGCAAACTGATATCCATTCACCCCAAGTTACTGTTCGAGAATCTTTGATCTATTCTGCTTTCCTTCGATTGCCTAAAGAGGTCAATAATGAGGAAAAAATGAAATTTGTTGACGAAGTAATGGACTTGGTTGAGCTAAACAATCTCAAGGATGCTATAGTTGGGCTTCCAGGTGTTACAGGGTTGTCAACCGAACAAAGAAAAAGGCTAACAATTGCTGTTGAACTCGTTGCTAATCCGTCAATCATTTTTATGGATGAACCAACTTCAGGTCTTGATGCAAGAGCAGCAGCCATTGTGATGAGGACTGTGAGAAACACTGTTGACACTGGAAGAACAGTTGTATGCACAATTCACCAACCTAGTATTGATATCTTTGAAGCCTTTGACGAGTTGTTGTTGATGAAGAGAGGAGGGCAAGTGATCTACTCAGGACCATTAGGAAGGAATTCACACAAGATTATAGAATATTTTGAGGCAATCCCAGAGGTCCCAAAAATTAAGGATAAGTACAACCCAGCTACATGGATGTTGGAGGTAAGCTCTATGGCAGCTGAAGTTCGGCTTCAAATGGATTTTGCTGAGTACTACAAATCATCATCTTTGTATCAGCGAAACAAAGCTCTTATAAGGGAGTTAGGTACACCTCCTCCAGGAGCAAAAGATTTGTACTTCCCCACTCAATATTCTCAATCCACTTGGGAACAATTCAAATCTTGTTTATGGAAACAATGGTTGACTTATTGGAGGAGTCCAGATTATAACCTTGTCAGATTTTTCTTCACTTTAGCTGCAGCTTTCTTGGTGGGGACAGTATTTTGGAGGGTTGGAAAAAACAGGGATAACACAGGAGATCTGAATACTATTATAGGAGCATTGTATGGTTCAGTTTTTTTTGTTGGTGTTAACAATTGCCAGACTGTTCAACCAGTAGTAGCCGTTGAAAGAACAGTATTCTATAGAGAAAGAGCTGCTGGAATGTATTCTGCTTTGCCTTATGCAATTGCACAGGTTATTTCCGAAATACCATATCTATTTGTTCAAACTATATTTTTCTCATTCATAGTGTATGCTATGGTGAGCTTTGAATGGAAAGTGGCCAAGGTCCTTTGGTTTTGCTTTGTTAGTTTCTTTTCCTTCATGTACTTTACATATTATGGGATGATGACTGTTTCCATTACACCAAACCACCAAATTGCATCAATCCTTGGAGCAGCATTTTATGGGATCTTCAATCTCTTTTCTGGTTTTTTTATCCCAAGACCAAAAATTCCTAAATGGTGGGTTTGGTATTATTGGATTTGCCCAGTAGCATGGACTGTATATGGGTTAATTGTCTCACAATATGGAGATGTAGAGATAGAGATTAGTGTGCTTGGTGCCAGTAACCAAACTATCAAGCATTATATTGAAGACCATTATGGGTTTAAACCAGACTTCATGGGGCCAGTTGCTGCTGTTTTGGTCGCTTTTCCTGTCTTCTTTGCCTTTGTATTTGCCTTCGCCATCAAAACACTAAACTTCCAAACCAGATAA 4458 0.406 MESGNLTRSISRSLSRSSWRMEGVFASGRYSRRTSNVDEDEEALKWAAIERLPTYDRLRTSILQTFAEADNADARPSTLQHREVDVRKLDVNERQEFIDRIFKVAEEDNEKYLRKFRNRLDKVGIRLPTVEVRYQNLIVEADCYIGSRALPTLPNVALNIAESALGLCGISTAKRTKLTILKNVTGIIKPSRMALLLGPPSSGKTTLLLALAGKLDNDLRVNGEISYNGYKLNEFVPRKTSAYISQNDVHIGEMTVKETLDFSARCQGVGTRYDLLSELARREKEAGIFPEAELDLFMKATAMEGTESSLITDYTLKILGLDICKDTIVGDEMQRGVSGGQKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCFQQIVHLTEATIFMSLLQPAPETFDLFDDIILISEGQIVYQGPREHIVEFFESCGFRCPERKGTADFLQEVTSRKDQEQYWANRSLPYRYITVSEFANRFKQFHVGMQLENELSVPYDKSRGHRAALVFKKYTVPTMGLLKACWDKEWLLIKRNAFVYVFKTGQIVIIGIIAATVFFRTNMHQRNEADAAVYIGSILFTMIMNMFNGFAELPLTIARLPIFYKHRDHLFHPPWTYTLPNFILRIPITMFEAIVWVLITYYTIGLAPEASRFFKHLLLVFLVQQMAAGMFRFISGVSRTMIIANTGGSLMLLLVFLLGGFILPKSSIPNWWIWGYWISPLTYGYNAFTVNELFAPRWSKPSSDGRTPIGIATLNNFDVFTEKRWYWIGVAALVGFIILYNVLFTFALMYLDPIGKKQAIISEEEASEMEGEGNFSEDPRLLKPEPNREIALQSLSSTDGNNTREVAMQQMGSRGNPSGIRSVDSMHESATGVAPKRGMVLPFQPLAMSFDSVNYYVDMPAEMKGQGVTDDRLQLLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDVRISGFPKNQETFARISGYCEQTDIHSPQVTVRESLIYSAFLRLPKEVNNEEKMKFVDEVMDLVELNNLKDAIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGPLGRNSHKIIEYFEAIPEVPKIKDKYNPATWMLEVSSMAAEVRLQMDFAEYYKSSSLYQRNKALIRELGTPPPGAKDLYFPTQYSQSTWEQFKSCLWKQWLTYWRSPDYNLVRFFFTLAAAFLVGTVFWRVGKNRDNTGDLNTIIGALYGSVFFVGVNNCQTVQPVVAVERTVFYRERAAGMYSALPYAIAQVISEIPYLFVQTIFFSFIVYAMVSFEWKVAKVLWFCFVSFFSFMYFTYYGMMTVSITPNHQIASILGAAFYGIFNLFSGFFIPRPKIPKWWVWYYWICPVAWTVYGLIVSQYGDVEIEISVLGASNQTIKHYIEDHYGFKPDFMGPVAAVLVAFPVFFAFVFAFAIKTLNFQTR* 1486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0176 1485 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 176 438 IPR027417 -
Gso15g0176 1485 Gene3D - 898 1132 IPR027417 -
Gso15g0176 1485 Pfam ABC-transporter N-terminal 94 156 IPR029481 -
Gso15g0176 1485 CDD ABCG_PDR_domain2 881 1119 IPR034003 -
Gso15g0176 1485 Pfam ABC-2 type transporter 518 729 IPR013525 GO:0016020|GO:0140359
Gso15g0176 1485 Pfam ABC-2 type transporter 1209 1423 IPR013525 GO:0016020|GO:0140359
Gso15g0176 1485 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 903 1121 IPR027417 -
Gso15g0176 1485 Pfam ABC transporter 181 363 IPR003439 GO:0005524
Gso15g0176 1485 Pfam ABC transporter 912 1064 IPR003439 GO:0005524
Gso15g0176 1485 CDD ABCG_PDR_domain1 174 420 IPR034001 -
Gso15g0176 1485 Pfam ABC-2 type transporter 1093 1154 IPR043926 GO:0140359
Gso15g0176 1485 Pfam ABC-2 type transporter 396 474 IPR043926 GO:0140359
Gso15g0176 1485 Pfam Plant PDR ABC transporter associated 734 797 IPR013581 -
Gso15g0176 1485 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 165 438 IPR003439 GO:0005524
Gso15g0176 1485 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 10 1485 - -
Gso15g0176 1485 SMART AAA_5 190 415 IPR003593 -
Gso15g0176 1485 SMART AAA_5 921 1113 IPR003593 -
Gso15g0176 1485 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 884 1137 IPR003439 GO:0005524
Gso15g0176 1485 PANTHER ATP-BINDING CASSETTE TRANSPORTER 10 1485 - -
Gso15g0176 1485 Gene3D - 168 468 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0176 Gso-Chr15 1478728 1489317 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0176 K08711 - gmx:100801386 2792.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0176 15 1478728 1489317 Gso11g3635 11 52048049 52059105 GST
Gso15g0176 15 1478728 1489317 Gso7g0134 7 1264140 1273283 PCT
Gso15g0176 15 1478728 1489317 Gso8g1672 8 16369730 16379248 PCT
Gso7g0134 7 1264140 1273283 Gso15g0176 15 1478728 1489317 PCT
Gso8g1672 8 16369730 16379248 Gso15g0176 15 1478728 1489317 PCT