Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1636 ATGTGTTCCTTCAAAAAATGGTTCAACTTGTACATCATTTTCCATGTCTTGGCTTCAACTCCAATATTCTCATTATCAGATCATTCCTCAAACCAACTCTCCACAAACTTTCTAGAAATTGCCAAGAAGCCCGATGTATTTGATTGGATGGTGAAAATCAGAAGGAAGATTCATGAGAATCCAGAGTTGCGTTATGAGGAATTTGAGACCAGTAAACTCATTAGAGAGGAATTAGATAAACTGGGTATACCATATAAACACCCAGTTGCTGTCACTGGTGTTATTGGCTTCATAGGGACAGGAGGGTCACCTTTTGTTGCAGTAAGAGCTGATATGGATGCACTTCCCATCCAGGAAATGGTGGAGTGGGAGCACAAGAGTAAAGTACCTGGAAAGATGCATGGGTGTGGTCATGATGCTCATCTCACTATGCTTCTTGGAGCTGCAAAGATTCTCAAACAATATGAAAAAGAGATACAGGGAACTGTTGTTCTTGTTTTCCAACCAGCAGAGGAAGGAGGTGCAGGGGCTAAGAAAATTATAGATTCTGGAGCCTTAGATAATGTTACTGCTATCTTTGGATTACATGTGGTGCCTGAGCTTCGAGTAGGTGAAGTGGCTTCTAGGTCTGGTCCAGTACTGGCAGGAAGTGGCATCTTTGAAGCAAAAATAAGTGGAAAGGGAGGTCATGCAGCCATTCCCCAACATTCTATAGACCCTCTATTGGCAGCTTCTAATGTCATCATTAGCTTACAACACCTTGTTTCTCGCGAGGCTGATCCTCTGGAACCACAGGTTGTGACAGTTTCAAAGTTCCAAGGAGGTGCTGCATTCAATGTTATTCCAGATTATGTCACAATTGGTGGCACCTTCCGAGCTTTTTCTGGAGAAACATTGCAGCACCTTAAACAGCGCATTGAGCAGGTCATCATTGGTCAAGCTGCTGTGCAGAGGTGTAATGCAAGTGTCAACTTCTTTGATGAAGAGAAACCTTTATATCCTCCAACTGTAAATCATGGTGAATTGCACAAGCTTTTTCTTGATGTAGCTGGCAATTTGATTGGCATCAATAATGTTATCATTGACGAGTCACCAAGCATGGGCTCTGAAGACTTTGCATTCTATCAAGAGGTCATACCTGGCTACTATTTCATGCTTGGAGTGAAGAGTTCACCTGAACCGAATCAGTCATTGCACTCACCCTATCTCAAAATCAATGAAAATGGGCTTCCCTATGGGGCTTCACTTCATGCATCATTAGCTGCTAATTATCTTATAAAATATCAGCACGACGTAGCCAAGGTAGCGGGGAAATATCATGATAAATTGTAA 1332 0.4219 MCSFKKWFNLYIIFHVLASTPIFSLSDHSSNQLSTNFLEIAKKPDVFDWMVKIRRKIHENPELRYEEFETSKLIREELDKLGIPYKHPVAVTGVIGFIGTGGSPFVAVRADMDALPIQEMVEWEHKSKVPGKMHGCGHDAHLTMLLGAAKILKQYEKEIQGTVVLVFQPAEEGGAGAKKIIDSGALDNVTAIFGLHVVPELRVGEVASRSGPVLAGSGIFEAKISGKGGHAAIPQHSIDPLLAASNVIISLQHLVSREADPLEPQVVTVSKFQGGAAFNVIPDYVTIGGTFRAFSGETLQHLKQRIEQVIIGQAAVQRCNASVNFFDEEKPLYPPTVNHGELHKLFLDVAGNLIGINNVIIDESPSMGSEDFAFYQEVIPGYYFMLGVKSSPEPNQSLHSPYLKINENGLPYGASLHASLAANYLIKYQHDVAKVAGKYHDKL* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1636 443 Pfam Peptidase dimerisation domain 219 310 IPR011650 -
Gso8g1636 443 PANTHER AUXIN CONJUGATE HYDROLASE 1 443 - -
Gso8g1636 443 CDD M20_IAA_Hyd 50 425 IPR044757 GO:0009850|GO:0016787
Gso8g1636 443 PANTHER PEPTIDASE M20 FAMILY MEMBER 1 443 IPR017439 GO:0016787
Gso8g1636 443 Gene3D - 215 333 - -
Gso8g1636 443 Gene3D Zn peptidases 50 409 - -
Gso8g1636 443 SUPERFAMILY Bacterial exopeptidase dimerisation domain 215 334 IPR036264 -
Gso8g1636 443 PIRSF Amidohydrol_AmhX 35 429 IPR017439 GO:0016787
Gso8g1636 443 TIGRFAM amidohydrolases: amidohydrolase 50 412 IPR017439 GO:0016787
Gso8g1636 443 Pfam Peptidase family M20/M25/M40 107 422 IPR002933 GO:0016787
Gso8g1636 443 SUPERFAMILY Zn-dependent exopeptidases 45 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1636 Gso-Chr8 15994240 15998885 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1636 K21604 K14664 gmx:100790140 884.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0114 7 1024382 1033532 Gso8g1636 8 15994240 15998885 GST
Gso11g3614 11 51817080 51820974 Gso8g1636 8 15994240 15998885 PCT
Gso8g1636 8 15994240 15998885 Gso11g3614 11 51817080 51820974 PCT