Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0114 ATGTGTTCCTTCAAAACATGGTTCAATTTGTTCATCATTTTCCTTGCCTCGGCTGCAACACCCATCTTCTCATTAACAGATTCCCCAAATCAACTCTCCACAAACTTTCTAGAAATTGCCAAGAAACCTGAAGTATTTGATTGGATGGTGAAAATCAGAAGGAAGATTCATGAGAATCCAGAATTGGGTTATGAGGAATTTGAGACCAGTAAACTCATTAGAGAGGAATTGGATAAACTGGGTGTCCCCTATAAACACCCAGTTGCTGTCACTGGTATTATTGGCTTCATTGGGACAGGAAAGTCACCTTTTGTTGCAATAAGAACTGATATGGATGCACTTCCCATCCAGGAAATGGTGGAGTGGGACCACAAGAGTAAGGTACCCGGAAAGATGCACGCGTGTGGTCACGATGCTCATGTCACTATGCTTCTTGGTGCAGCAAATATTCTCAAACAGCACGAAAAAGAGATACAGGGAACTGTTGTTCTTGTTTTCCAACCAGCGGAGGAGGGAGGCGCAGGGGCTAAGAAAATTTTAGATGCTGGAGCCTTAGAAAATGTTACTGCTATCTTTGCATTACATGTGATGCCTGACATTCCACTAGGTGAAGCAGCCTCTAGGTCTGGTCCAATATTGGCAGGAAGTGGTACCTTCGAAGCAATAATAAGTGGAAAGGGAGGTCATGCAGCCATTCCCCAACATTCTATAGACCCTGTATTGGCAGCTTCTAATGTCATTATTAGCTTACAGCACCTTGTCTCTCGTGAGGCTGATCCTCTGGATCCCCAGGTTGTGACAGTTGCTAAGTTCCAAGGAGGTGGTGCATTCAATGTTATTCCAGATTATGTCACAATTGGTGGCACCTTTCGAGCTTTTTCTAGAGAAAAATTGGACCAACTTAAACAGCGCATTAAGCAGGTTGTCATTGGTCAAGCTGCTGTGCAGAGGTGTAATGCAACTGTCAACTTCCTTGATGAAACAAGACCTTCATATCCTCCAACTGTAAATAATGGTGACTTGCACAAGCTTTTTGTTGATGTAGCTGGCAATTTGCTTGGCACCAATAATGTTAATATTGAGAAGACACCTATCATGGCCGCTGAAGACTTTGCATTCTATCAAGAGGTCATACCTGGCTACTTCATCATGCTTGGAGTGAAGAGTGCTTCGCCTGAACCGCACCAGTCATTACACTCACCCTATCTCAAAATCAGTGAAGATGCACTTCCTTATGGGGCTGCACTTCATGCATCATTGGCTACTAGTTATCTTCTGAGGTACCAGCAGGACGTAGCCAAGGTAGTTGGGAAATATCATGATGAATTATAA 1332 0.4347 MCSFKTWFNLFIIFLASAATPIFSLTDSPNQLSTNFLEIAKKPEVFDWMVKIRRKIHENPELGYEEFETSKLIREELDKLGVPYKHPVAVTGIIGFIGTGKSPFVAIRTDMDALPIQEMVEWDHKSKVPGKMHACGHDAHVTMLLGAANILKQHEKEIQGTVVLVFQPAEEGGAGAKKILDAGALENVTAIFALHVMPDIPLGEAASRSGPILAGSGTFEAIISGKGGHAAIPQHSIDPVLAASNVIISLQHLVSREADPLDPQVVTVAKFQGGGAFNVIPDYVTIGGTFRAFSREKLDQLKQRIKQVVIGQAAVQRCNATVNFLDETRPSYPPTVNNGDLHKLFVDVAGNLLGTNNVNIEKTPIMAAEDFAFYQEVIPGYFIMLGVKSASPEPHQSLHSPYLKISEDALPYGAALHASLATSYLLRYQQDVAKVVGKYHDEL* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0114 443 CDD M20_IAA_Hyd 49 425 IPR044757 GO:0009850|GO:0016787
Gso7g0114 443 Gene3D - 214 332 - -
Gso7g0114 443 Pfam Peptidase family M20/M25/M40 106 421 IPR002933 GO:0016787
Gso7g0114 443 PANTHER PEPTIDASE M20 FAMILY MEMBER 1 443 IPR017439 GO:0016787
Gso7g0114 443 SUPERFAMILY Zn-dependent exopeptidases 44 425 - -
Gso7g0114 443 PIRSF Amidohydrol_AmhX 34 429 IPR017439 GO:0016787
Gso7g0114 443 SUPERFAMILY Bacterial exopeptidase dimerisation domain 215 324 IPR036264 -
Gso7g0114 443 Gene3D Zn peptidases 49 410 - -
Gso7g0114 443 PANTHER AUXIN CONJUGATE HYDROLASE 1 443 - -
Gso7g0114 443 TIGRFAM amidohydrolases: amidohydrolase 49 412 IPR017439 GO:0016787
Gso7g0114 443 Pfam Peptidase dimerisation domain 215 309 IPR011650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0114 Gso-Chr7 1024382 1033532 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0114 K21604 K14664 gmx:121172631 843.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0114 7 1024382 1033532 Gso7g0114 7 1024382 1033532 ECH
Gso7g0114 7 1024382 1033532 Gso8g1636 8 15994240 15998885 GST
Gso11g3614 11 51817080 51820974 Gso7g0114 7 1024382 1033532 PCT
Gso7g0114 7 1024382 1033532 Gso11g3614 11 51817080 51820974 PCT