Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3614 ATGGGTTTTTTCTTGAAATGGGTCAACTTGTTTGTCTTTTTTCATTTCCTTGCTGCAACACCCATCTTCTCAGATTCCTCATCCAGCTCAAATGCAATCGCCACCACCAAGTTCCTTGATTTAGCCAAGGATCCTCGGGTTTTTGATTGGATGGTTGGTATCAGGAGGAAGATTCATGAGAATCCAGAACTGGGTTATGAGGAATTTGAGACCAGTAAGCTGATTAGAGCTGAATTGGATAAACTGGGCATCTCATATAAACACCCAGTTGCAGTCACGGGTGTTGTTGGCTTCATAGGGACTGGACTTCCTCCTTTTGTTGCATTAAGAGCTGACATGGATGCTCTTCCTATGCAGGAAATGGTGGAGTGGGAGCACAAGAGTAAAGTACCTGGAAAGATGCATGCATGCGGTCATGATGCTCATGTTGCCATGCTTCTTGGTGCTGCAAAGATCCTCAAAGAGCATGAAAATGAGATACGAGGAACTGTTGTTCTTGTTTTTCAACCAGCAGAAGAAGGAGGTGGAGGGGCTAAGAAAATTTTAGATGCTGGAGTCTTGGAAAACATCTCTGCCATATTCGGATTGCATATTGCACCTACCTATCCTATAGGTGAAGTGGCCTCTAGGTCGGGTCCCATATTTGCAGGAAGCGGCTTCTTTGAAGCAACAATAAATGGCAGGGGAGGCCATGCTGCTATCCCTCAGCACTCTATAGACCCAATATTGGCAGCTTCCAATGTGATTGTTAGTTTACAGCATATTGTTTCTCGCGAGGCCGATCCTCTGGACTCCCAGGTCGTCACTGTAGGAAAATTTCAGGGAGGTGGTGCTTTCAATGTTATTCCAGACTCTGTTGCAATTGGTGGCACCTTCCGAGCTTTTTCAAAAGAAAGCTTCATGCAACTGAGACAGCGGATTGAACAGGTTATCACTGGGCAAGCTGCAGTGCAGAGATGCAATGCAACGGTCAACTTTCTTGACGACGAGAAACCTTTCTTCCCTCCTACAGTAAACAATGGTGACTTGCATGAGTACTTTAAAAGTGTTGCTGGGAGTTTGCTTGGCGTCAATAATGTTAAGGACATGCAACCATTGATGGGATCTGAGGACTTTGCATTCTATCAAGAGGTTTTTCCGGGATACTTCTTCCTCCTTGGAATGGAGAATGTCTCTATTGAACATCTTGAATCTCCACACTCTCCATATTTCAAAATCAATGAGGACGCACTTCCTTATGGAGCTGCACTTCATGCATCATTAGCTAGTAGCTATCTTCTCAAATTAAATCAGGACATACCAGTAGTGGAGGGGAAACATCACGATGAATTATAG 1335 0.4434 MGFFLKWVNLFVFFHFLAATPIFSDSSSSSNAIATTKFLDLAKDPRVFDWMVGIRRKIHENPELGYEEFETSKLIRAELDKLGISYKHPVAVTGVVGFIGTGLPPFVALRADMDALPMQEMVEWEHKSKVPGKMHACGHDAHVAMLLGAAKILKEHENEIRGTVVLVFQPAEEGGGGAKKILDAGVLENISAIFGLHIAPTYPIGEVASRSGPIFAGSGFFEATINGRGGHAAIPQHSIDPILAASNVIVSLQHIVSREADPLDSQVVTVGKFQGGGAFNVIPDSVAIGGTFRAFSKESFMQLRQRIEQVITGQAAVQRCNATVNFLDDEKPFFPPTVNNGDLHEYFKSVAGSLLGVNNVKDMQPLMGSEDFAFYQEVFPGYFFLLGMENVSIEHLESPHSPYFKINEDALPYGAALHASLASSYLLKLNQDIPVVEGKHHDEL* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3614 444 CDD M20_IAA_Hyd 51 426 IPR044757 GO:0009850|GO:0016787
Gso11g3614 444 PIRSF Amidohydrol_AmhX 37 430 IPR017439 GO:0016787
Gso11g3614 444 Pfam Peptidase family M20/M25/M40 108 422 IPR002933 GO:0016787
Gso11g3614 444 PANTHER PEPTIDASE M20 FAMILY MEMBER 3 444 IPR017439 GO:0016787
Gso11g3614 444 PANTHER AUXIN CONJUGATE HYDROLASE 3 444 - -
Gso11g3614 444 SUPERFAMILY Bacterial exopeptidase dimerisation domain 216 335 IPR036264 -
Gso11g3614 444 Pfam Peptidase dimerisation domain 217 314 IPR011650 -
Gso11g3614 444 TIGRFAM amidohydrolases: amidohydrolase 51 413 IPR017439 GO:0016787
Gso11g3614 444 SUPERFAMILY Zn-dependent exopeptidases 47 427 - -
Gso11g3614 444 Gene3D Zn peptidases 51 411 - -
Gso11g3614 444 Gene3D - 216 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3614 Gso-Chr11 51817080 51820974 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3614 K21604 - gmx:100794121 873.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g3614 11 51817080 51820974 Gso7g0114 7 1024382 1033532 PCT
Gso11g3614 11 51817080 51820974 Gso8g1636 8 15994240 15998885 PCT
Gso7g0114 7 1024382 1033532 Gso11g3614 11 51817080 51820974 PCT
Gso8g1636 8 15994240 15998885 Gso11g3614 11 51817080 51820974 PCT