Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1598 ATGGCTTCATTTGGTGCAGTCAATTACAAATTCTTCTTGTGCCTACTTCTATGGCTCTGGAACTTTCTACCTCTATCTCAAGGTAATCAGCACTGGCATGAAAATAGATACCCTTTTATCAGAAATGCAAGCTCATTCTCATCACCATCAATTTCAACTACGACAAGCAATAATGCCTATGACTACATAATAGTTGGAGGAGGCACAGCAGGGTGTCCTTTGGCTGCAACCCTCTCTCAGAACTTCAGTGTTTTGGTGCTTGAAAGAGGGGGTGTTCCTTTCACCAACCCCAATGTTTCATTTCTGGAGAACTTCCACATTACATTGGCCGACATTTCACCAACTTCAGCTTCTCAGTACTTCATTTCAACTGATGGAGTCTACAATTCAAGGGCAAGGGTCTTGGGAGGTGGAAGTTCTATCAATGCTGGCTTCTACACTAGAGCAAACCCAAGGTTTATAAAGAAGGTGGGGTGGGATGCCAAGCTAGTAAATGAATCATATCCATGGGTTGAGAAGCAAATTGTCCACCGTCCAAAGTTTTCACCTTATCAGAGAGCATTTAGAGACAGTCTTCTAGACTCTGGTGTGTCACCCTTTAATGGCTTCACCTATGATCATCTCTATGGAACAAAGGTTGGTGGAACCATTTTCGACAGATTTGGCCGCCGTCACACGGCTGCTGAACTGCTTGCTTCAGGGAACCATGACAAACTTACTGTTTTGGTCTGTGCCACTGTCCAAAAGATTGTGTTTGATAGAAAAGGAAAGAGACCAAAAGCTGTGGGGGTTATTTTCCAAGATGAACATGGGAAACAGCATGAGGCTATTCTGTCAAATGATAAGCACAGTGAAGTGATAATGTCTAGTGGGGCAATTGGGACTCCTCAGTTGCTAATGCTTAGTGGAATTGGGCCAAAAGCAGAACTCCAGAAGTTGAGCATCCCAGTGGTCCTTGACAACCACTTTGTTGGGAAAGGAATGGTAGATAATCCCATGAACACAATGTTTGTTCCTTCTAATAGACCAGTTAATCAGTCACTCATAGAAACTGTTGGTATCACCAAAATGGGTGTCTACATTGAGGCTAGCAGTGGGTTTAGTCAGTCCAATGATAGCATTCACTGTCACCATGGTATCATGTCAGCTGAGATTGGGCAGCTGTCTACAATTCCTCCTAAGGAAAGATCACCAGAAGCTGTTCAAGAATTTATCAAGAACAAGAAAGACATACCGGTTGAATTATTCAAGGGAGGTTTTATTTTGTCAAAAGTTGCCAATCCTTGGTCAGTAGGTGAACTCAGGCTGAACAACACCAATGTGAACGACAACCCTGTCGTTACCTTCAACTACTTCAGTCATCCATATGATCTTCATCGCTGTGTCAAGGGGATTCGCTTGGCCATTAAGGTTGTCCAGTCAAAACACTTCACAAACTACACTTTGTGTGACAAGAAAACCACAGAGGAACTGCTGAACCTCACTGTCAAGGCTAATGTCAACTTCATACCCAAGCATCCCAATGACACAGCGTCGATAGCACAGTTCTGCAAAGACACCGTGATCACAATTTGGCACTACCATGGAGGGTGCCATGTGGGGAAGGTAGTCAGCCCTGATTACAAGGTTCTTGGCGTTGACAGACTTCGTGTGGTAGACGGCTCAACATTTGACGAATCACCAGGAACAAATCCTCAAGCAACTGTCATGATGATGGGCAGGTACATGGGGCTGAAGATTTTGAGACATAGGTTGGGGAAATTGGCTGGTATATAA 1776 0.4398 MASFGAVNYKFFLCLLLWLWNFLPLSQGNQHWHENRYPFIRNASSFSSPSISTTTSNNAYDYIIVGGGTAGCPLAATLSQNFSVLVLERGGVPFTNPNVSFLENFHITLADISPTSASQYFISTDGVYNSRARVLGGGSSINAGFYTRANPRFIKKVGWDAKLVNESYPWVEKQIVHRPKFSPYQRAFRDSLLDSGVSPFNGFTYDHLYGTKVGGTIFDRFGRRHTAAELLASGNHDKLTVLVCATVQKIVFDRKGKRPKAVGVIFQDEHGKQHEAILSNDKHSEVIMSSGAIGTPQLLMLSGIGPKAELQKLSIPVVLDNHFVGKGMVDNPMNTMFVPSNRPVNQSLIETVGITKMGVYIEASSGFSQSNDSIHCHHGIMSAEIGQLSTIPPKERSPEAVQEFIKNKKDIPVELFKGGFILSKVANPWSVGELRLNNTNVNDNPVVTFNYFSHPYDLHRCVKGIRLAIKVVQSKHFTNYTLCDKKTTEELLNLTVKANVNFIPKHPNDTASIAQFCKDTVITIWHYHGGCHVGKVVSPDYKVLGVDRLRVVDGSTFDESPGTNPQATVMMMGRYMGLKILRHRLGKLAGI* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1598 591 PANTHER OSJNBA0019K04.7 PROTEIN 2 591 - -
Gso8g1598 591 SUPERFAMILY FAD/NAD(P)-binding domain 52 582 IPR036188 -
Gso8g1598 591 PIRSF Alcohol_oxidase 40 589 IPR012132 GO:0050660
Gso8g1598 591 SUPERFAMILY FAD-linked reductases, C-terminal domain 328 530 - -
Gso8g1598 591 PANTHER GLUCOSE-METHANOL-CHOLINE (GMC) OXIDOREDUCTASE FAMILY PROTEIN 2 591 - -
Gso8g1598 591 Gene3D - 177 523 - -
Gso8g1598 591 ProSitePatterns GMC oxidoreductases signature 2. 291 305 IPR000172 GO:0016614|GO:0050660
Gso8g1598 591 Pfam GMC oxidoreductase 60 332 IPR000172 GO:0016614|GO:0050660
Gso8g1598 591 Gene3D - 60 573 IPR036188 -
Gso8g1598 591 Pfam GMC oxidoreductase 428 574 IPR007867 GO:0016614
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1598 Gso-Chr8 15625394 15632976 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1598 60 584 Miscellaneous Gene Families AT5G51950 53.484 0.0 546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1598 K15403 - gmx:100779461 1172.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0085 7 738327 745184 Gso8g1598 8 15625394 15632976 GST
Gso15g0215 15 1943762 1951000 Gso8g1598 8 15625394 15632976 PCT
Gso11g3597 11 51657204 51663718 Gso8g1598 8 15625394 15632976 PCT
Gso8g1598 8 15625394 15632976 Gso15g0215 15 1943762 1951000 PCT
Gso8g1598 8 15625394 15632976 Gso11g3597 11 51657204 51663718 PCT