Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3597 ATGGCGTTCATTGGTGCAGTCAAATTCTTGCTGCAGCACTTACTTCTATTATGCCTCTTCAACTATCTACCTTTTTCTCAAGGTAAGCAGAACTGGAATGAAGGGTACCCGTTTATAAGAAGAGCAAGTTCATTGGGTTATAATGGGAAAAGTGGTGGGTATGATTATATAATAGTGGGGGGTGGAACAGCAGGGTGTCCATTGGCTGCAACACTGTCAAAGAAGTTCAAAGTTCTGGTGCTTGAGAGAGGAGGAGTCCCTTTCAACAACCCTAATGTCTCATTTCTGCACAACTTTCACATTACATTGGCAGACACTTCACCAACTTCGGCTTCTCAGTACTTCATTTCAACAGACGGAGTCCTCAATGCAAGGGGAAGGGTTTTGGGTGGCGCCACTTCCATTAACGCTGGCTTCTACACTAGAGCAGACCCAAGATTTATAAGGAAGGTGGGGTGGGATACAAAGCTAGTGAATGAGTCATATCCTTGGGTTGAGAAGCAGATTGTTCACCGGCCAAAGTTTTCAGATTGGCAGAGAGCAGTTAGGGACGGGCTTCTAGCTGCTGGTGTGTCTCCTTTCAACGGCTTCACCTATGATCACAAGTATGGAACCAAAGTTGGTGGAACCATTTTTGACAGATTTGGTCGTCGCCACACAGCTGCTGAATTGCTTGCTTCTGCCAACCCTCACAAACTTACTGTTTTGATCCATGCCACTGTCCAAAAGATTGTTTTTGATACAAAAGGAAAAAGACCAAAAGCTACAGGGGTTATTTTCAAGGATGAAAATGGGAAGCAGCATGAGGCATATCTAGGAAATGACAGGCAGAGTGAGGTGATTGTGTCCAGTGGGGCACTTGGGACTCCTCAATTGCTATTGCTGAGTGGAATTGGCCCAAAAGCAGAGCTTCAGAAATTGAACATCCCTGTTGTGCTTGATAATCAATTTGTTGGGAAAGGCATGGCTGATAACCCCATGAACACAATTTTTGTTCCTTCCAAGAGACCAGTTCAGCAGTCACTCATAGAAACTGTTGGTATTACCAATTTGGGTGTCTACATTGAGACCAGCAGTGGGTTTGGCCAGTCCAAAGACAGCATTCACTGCCACCATGGTATCTTGTCAGCTGAGATTGGGCAGTTGTCCACAATTCCACCAAAGCAAAGATCACGAGAAGCTGTAAAAGCTTATGTGAAGAGCAAGAGAGACATACCAGTTGAAGCATTCAGGGGAGGGTTCATATTGTCAAAAGTTGCGAACCCTTGGTCAACAGGTGAGCTCAAGTTGATAAACACCAACGTAGAGGACAACCCTGCTGTTACCTTCAACTACTTCAGTCACCCTTATGATCTTAAGCGCTGTGTGGAGGGTATCCGCTTGGCAATAAAGGTTGTCCAGACAGAACACGTCACAAACTACACTTTGTGTGAGAGAGAAAATGCAGAGAAAATGCTTAACCTCAGTGTGAAGGCCAATATCAACCTCATTCCCAAGCATCCCAATGACACAAAGTCAGTAGAGCAGTTTTGTAGAGACTCTGTGATCACTATTTGGCACTACCATGGTGGGTGCCATGTGGGGAAGGTTGTTAACTCTGAGCATAAGGTTCTTGGTGTTGATAGACTTCGTGTGGTTGATGGCTCAACATTTTCTGAGTCGCCAGGAACCAACCCTCAAGCCACTGTGATGATGATGGGCAGGTACATGGGACTGAAGATTTTAAGGGACAGGCTGGGGAAATTGGCTGGTATTTAA 1758 0.4522 MAFIGAVKFLLQHLLLLCLFNYLPFSQGKQNWNEGYPFIRRASSLGYNGKSGGYDYIIVGGGTAGCPLAATLSKKFKVLVLERGGVPFNNPNVSFLHNFHITLADTSPTSASQYFISTDGVLNARGRVLGGATSINAGFYTRADPRFIRKVGWDTKLVNESYPWVEKQIVHRPKFSDWQRAVRDGLLAAGVSPFNGFTYDHKYGTKVGGTIFDRFGRRHTAAELLASANPHKLTVLIHATVQKIVFDTKGKRPKATGVIFKDENGKQHEAYLGNDRQSEVIVSSGALGTPQLLLLSGIGPKAELQKLNIPVVLDNQFVGKGMADNPMNTIFVPSKRPVQQSLIETVGITNLGVYIETSSGFGQSKDSIHCHHGILSAEIGQLSTIPPKQRSREAVKAYVKSKRDIPVEAFRGGFILSKVANPWSTGELKLINTNVEDNPAVTFNYFSHPYDLKRCVEGIRLAIKVVQTEHVTNYTLCERENAEKMLNLSVKANINLIPKHPNDTKSVEQFCRDSVITIWHYHGGCHVGKVVNSEHKVLGVDRLRVVDGSTFSESPGTNPQATVMMMGRYMGLKILRDRLGKLAGI* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3597 585 Pfam GMC oxidoreductase 54 326 IPR000172 GO:0016614|GO:0050660
Gso11g3597 585 ProSitePatterns GMC oxidoreductases signature 2. 285 299 IPR000172 GO:0016614|GO:0050660
Gso11g3597 585 SUPERFAMILY FAD-linked reductases, C-terminal domain 322 524 - -
Gso11g3597 585 Gene3D - 54 567 IPR036188 -
Gso11g3597 585 PIRSF Alcohol_oxidase 40 584 IPR012132 GO:0050660
Gso11g3597 585 PANTHER GLUCOSE-METHANOL-CHOLINE (GMC) OXIDOREDUCTASE FAMILY PROTEIN 2 585 - -
Gso11g3597 585 Pfam GMC oxidoreductase 422 568 IPR007867 GO:0016614
Gso11g3597 585 SUPERFAMILY FAD/NAD(P)-binding domain 54 577 IPR036188 -
Gso11g3597 585 PANTHER OSJNBA0019K04.7 PROTEIN 2 585 - -
Gso11g3597 585 Gene3D - 171 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3597 Gso-Chr11 51657204 51663718 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3597 54 580 Miscellaneous Gene Families AT3G56060 51.412 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3597 K15403 - gmx:100784433 1172.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0215 15 1943762 1951000 Gso11g3597 11 51657204 51663718 GST
Gso11g3597 11 51657204 51663718 Gso7g0085 7 738327 745184 PCT
Gso11g3597 11 51657204 51663718 Gso8g1598 8 15625394 15632976 PCT
Gso7g0085 7 738327 745184 Gso11g3597 11 51657204 51663718 PCT
Gso8g1598 8 15625394 15632976 Gso11g3597 11 51657204 51663718 PCT