Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0215 ATGGCGTTCATTGGTGCAGTCAAATTCTTGCTGCAGTACTTAGTTCTATTATGCCTCCTCAACTATCTACCTCTTTCTCAAGGTAAGCAGAACTGGAATGAAGGGTACCCATTTATAAGAAGAGCAAGTTCATTGGGTTATAATGGGAAAAGTGGAGGGTATGATTATATAATAGTGGGGGGTGGAACAGCAGGGTGTCCATTGGCTGCAACCCTGTCTCAGAAGTTCAAAGTTCTGCTGCTTGAAAGAGGAGGAGTCCCTTTCAACAACCCTAATGTGTCATTTCTGCACAACTTTCACATTACATTGGCAGACACTTCACCAACTTCGGCTTCTCAGTACTTCATTTCAACAGATGGAGTCCTCAATGCAAGGGGAAGGGTTTTGGGTGGTGGCAGTTCCATTAACGCTGGCTTCTACACTAGAGCAGACCCAAGATTTATAAGGAAGGTGGGGTGGGATACAAAGCTAGTGAATGAGTCATATCCTTGGGTTGAGAAGCAGATTGTTCACCGGCCAAAGTTTTCAGATTGGCAGAGAGCAGTTAGGGACGGGCTTCTAGCAGCTGGTGTGTCTCCTTTCAATGGCTTCACCTATGATCACAAGTACGGAACCAAAGTTGGTGGAACCATTTTTGACAGATTTGGCCGTCGCCACACAGCTGCTGAATTGCTTGCTTCTGCCAACCCTCACAAACTTACTGTTTTGATCCATGCCACTGTCCAAAACATTGTTTTTGATACAACAGGAAAAAGACCAAAAGCTACCGGGGTTATTTTCAAGGATGAAAATGGGAAGCAGCATGAGGCGTATCTAGGAAATGACAGGCAGAGTGAGGTGATTGTGTCTAGTGGGGCACTTGGGACTCCTCAATTGCTATTGCTGAGTGGAATTGGCCCAAAAGCAGAGCTTCAGAAATTGAACATCCCTGTGGTGCTTGACAACCAATTTGTTGGGAAAGGCATGGCTGATAACCCCATGAACACAATTTTTGTTCCTTCCAAAAGATCAGTTCAGCAGTCACTCATAGAAACTGTTGGTATTACCAATTTGGGTGTCTACATTGAGACCAGCAGTGGGTTTGGCCAGTCCAAAGACAGCATTCACTGCCACCATGGTATCTTGTCAGCTGAGATTGGACAGTTGTCCACAATTCCACCAAAGCAAAGATCACAAGAAGCTGTTAAAGCTTATGTGAAGAGCAAGAGAGACATACCAGTTGAAGCATTCAGGGGAGGGTTCATATTGTCAAAAGTTGCGAACCCTTGGTCAACAGGTGAGCTCAAGTTGAAAAACACCAACGTGGAGGACAACCCTGCTGTTACCTTCAACTACTTCAGCCACCCTTATGATCTTAGGCGCTGTGTGGAGGGTATTCGCTTGGCGATAAAGGTTGTCCAGTCAGAACACGTCACAAACTACACTTTGTGTGAGAGAGAAACTGCAGAGAAAATGCTTAACCTCAGTGTGAAGGCCAATATCAACCTCATTCCCAAGCGCCCCAATGACACAAAGTCAGTAGAACAGTTTTGTAGAGACTCCGTGATCACTATTTGGCACTACCATGGTGGGTGCCATGTGGGGAAGGTGGTTAACTCTGAGCATAAGGTTCTTGGTGTTGATAGACTCCGTGTGGTTGATGGCTCAACATTTTCTGAGTCACCAGGAACCAACCCTCAAGCTACTGTGATGATGATGGGCAGGTACATGGGACTGAAGATTTTAAGGGACAGGTTGGGAAAATTGGCTGGTATTTAA 1758 0.4551 MAFIGAVKFLLQYLVLLCLLNYLPLSQGKQNWNEGYPFIRRASSLGYNGKSGGYDYIIVGGGTAGCPLAATLSQKFKVLLLERGGVPFNNPNVSFLHNFHITLADTSPTSASQYFISTDGVLNARGRVLGGGSSINAGFYTRADPRFIRKVGWDTKLVNESYPWVEKQIVHRPKFSDWQRAVRDGLLAAGVSPFNGFTYDHKYGTKVGGTIFDRFGRRHTAAELLASANPHKLTVLIHATVQNIVFDTTGKRPKATGVIFKDENGKQHEAYLGNDRQSEVIVSSGALGTPQLLLLSGIGPKAELQKLNIPVVLDNQFVGKGMADNPMNTIFVPSKRSVQQSLIETVGITNLGVYIETSSGFGQSKDSIHCHHGILSAEIGQLSTIPPKQRSQEAVKAYVKSKRDIPVEAFRGGFILSKVANPWSTGELKLKNTNVEDNPAVTFNYFSHPYDLRRCVEGIRLAIKVVQSEHVTNYTLCERETAEKMLNLSVKANINLIPKRPNDTKSVEQFCRDSVITIWHYHGGCHVGKVVNSEHKVLGVDRLRVVDGSTFSESPGTNPQATVMMMGRYMGLKILRDRLGKLAGI* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0215 585 Pfam GMC oxidoreductase 54 326 IPR000172 GO:0016614|GO:0050660
Gso15g0215 585 ProSitePatterns GMC oxidoreductases signature 2. 285 299 IPR000172 GO:0016614|GO:0050660
Gso15g0215 585 PIRSF Alcohol_oxidase 39 584 IPR012132 GO:0050660
Gso15g0215 585 PANTHER GLUCOSE-METHANOL-CHOLINE (GMC) OXIDOREDUCTASE FAMILY PROTEIN 2 585 - -
Gso15g0215 585 Gene3D - 171 517 - -
Gso15g0215 585 Pfam GMC oxidoreductase 422 568 IPR007867 GO:0016614
Gso15g0215 585 Gene3D - 54 567 IPR036188 -
Gso15g0215 585 SUPERFAMILY FAD-linked reductases, C-terminal domain 322 524 - -
Gso15g0215 585 SUPERFAMILY FAD/NAD(P)-binding domain 54 577 IPR036188 -
Gso15g0215 585 PANTHER OSJNBA0019K04.7 PROTEIN 2 585 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0215 Gso-Chr15 1943762 1951000 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0215 54 578 Miscellaneous Gene Families AT5G51950 51.698 0.0 536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0215 K15403 - gmx:100818122 1167.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0215 15 1943762 1951000 Gso11g3597 11 51657204 51663718 GST
Gso15g0215 15 1943762 1951000 Gso7g0085 7 738327 745184 PCT
Gso15g0215 15 1943762 1951000 Gso8g1598 8 15625394 15632976 PCT
Gso7g0085 7 738327 745184 Gso15g0215 15 1943762 1951000 PCT
Gso8g1598 8 15625394 15632976 Gso15g0215 15 1943762 1951000 PCT