Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1126 ATGGGTGGTGGGGGGAGAGGAGGCAGATCCCGAACTCAGAGAAAGCACTTCCGGCAGAGCAGAGATAACGTGTGGAAGCGTTCCAAATCGGATCCCAATCCTTCTTCCAACGAAAACAATCCCCCGTGGACTCCCTTCGCCACTGAGAACGCCGCTTTCGATTTCTACTACAAAGAGCAGGGGATAGTGGACCCGCAACACTGGGACCAATTCGTCGCAGTTCTCAGAACTCCATTGCCCGCAACCTTCAGAATCAACTCTAGTAGCCAGTTTTCCGACGACCTTCGTTCTCAATTGGAGAATGACTTCCTGCATTCTCTTCGCGACGAGGTTGTTGAAGGAGGTGAGACGGAGGCTATTCGGCCGTTGCTGTGGTACCCTGGGAACTTCGCTTGGCATTCTAATTTTTCCAGGATGCAGCTCAGGAAGAACCAAACACTTGAGAGGTTCCATGAATTCTTAAAGCTAGAAAATGAGATTGGAAATATCACAAGACAGGAAGCTGTCAGTATGGTTCCTCCCCTCTTCTTGGATGTGCATTCAGATCATTTTGTGCTTGATATGTGTGCTGCACCAGGTTCAAAAACATTCCAATTGCTTGAGATTATACACCAATCATCTAAAACAAGATCACTACCTGATGGAATGGTTATAGCAAATGATCTCGATGTCCAAAGATGTAATCTTCTCATCCACCAAACAAAAAGAATGTGCACAGCCAACCTAATTGTTACAAATCACGAAGCTCAGCACTTCCCAGGATGCCGTTTAAACAGGAATTATGAAAGGATGGAGTTAGATAACAATATTAGCCAACTGTTATTTGATCGTGTTCTATGTGATGTCCCATGCAGTGGAGATGGTACCCTTCGTAAGGCACCTGATCTATGGAGGAAATGGAACACAGGGATGGGACATGGCCTTCACAGCCTACAGGTTTTAATTGCTATGCGAGGTTTATCTCTACTTAAAATTGGTGGAAGAATGGTCTATTCAACATGCTCAATGAATCCTATTGAGAATGAAGCTGTGGTTGCTGAGGTTTTGCGAAGGTGTGGAGGGTCTGTTAAACTTCTTGATGTCTCTAGTGAGCTTCCACAACTTATTCGTCGGCCAGGTCTCAGGAGATGGAAGGTATATGACAAGGGCACTTGGTTGGTCTCTTACAAAGATGTTCCTAAGTATCGTAGAAGTGTAATTCTTTCCAGTATGTTTCCTTCTGGCAGAGGCCATCATGATCTTGTGGATAGTAGTTGTAGTGTTGATCCAGAGGGCGTTACTAATGGTATTAATGGAAATGCTGGAGATGGTGTTCAAGCAGTTGAGAATCCTGTGATGTCCGAGTCTGGTGCGGAAGTTTGCGATTTCCCTCTAGAGCGTTGCATGAGGATAGTGCCTCATGATCAGAACACTGGAGCCTTCTTCATTGCTGTACTGCAAAAAGTTTCTCCTCTGCCAGCAATTACAGAACAAACAAAAATAAAAAATGATGAGCAATATGTAGAACCCGCAAACCAGAGTCTTAATGATGCACAAGTACCACATATTACTTCATCAGAAAGTGCACACGAAGAAGTCTTCAAAGCAGTGTCTGAGGAAAATGTAGATGACGCTGAACCCAACACTGAAGATTTGGAAGTTGGTCCTGTTACATGTGAAGAACAGAATTCCAAGGAAACTCAAGAACCTGATAATGTACAAAACACAGCAAAGAGGGTTCCAGGCAAAAGAAAGCTACAAATTCAAGGCAAATGGAGGGGTGTTGACCCTGTTGTCTTTTTCAAAGATGAAACAATTATTAATAGTATAAGGGATTTCTATGGAATTGATGAGCGTTTTCCATTCAATGGTCACCTTGTTACAAGAAACAGTGATACAAATCATGTGAAAAGAATTTATTATATCTCCAAGTCAGTCAAGGATGTTCTTGAGTTGAACTTCAAAGTTGGGCAGCAACTTAAAATAACATCAATTGGCCTGAAGATGTTTGAAAGACAAACAGCGCGAGAAGGTAGCTCTGCATCATGTGCTTTCCGGATATCATCCGAAGGATTGCCCCTTATTCTCCCATACATAACCAAGCAGATTCTGCATGCATCTCCTGCAGACTTCAAGCATATTCTGCAGAACAAAGAAGTAAAATTTGAAGATTTTAATGATGCTGAGTTTGGTGAAAAGGCAGCAAACCTATTGCCAGGCTGTTGTGTGGTAATTCTGCATATAGGGAACACACTTGCTGCAGAGTCTCTCCAAGTGGATGAGTCAACGATAGCCATTGGATGCTGGAAGGGTAGGGCGAGATTGTCAGTGATGGTTACTGCAATGGACTGCCAAGAACTACTTGAAAGGCTTTTAATACGGTTTGACACTGAAAAGGGTTCCTCTGGGCATGCAGACAAATCCTCTAATGATGTGCAAGAGTTGAACAGTATAAATGATGGCGTGAAAGTTACTGTGAGTTAA 2463 0.432 MGGGGRGGRSRTQRKHFRQSRDNVWKRSKSDPNPSSNENNPPWTPFATENAAFDFYYKEQGIVDPQHWDQFVAVLRTPLPATFRINSSSQFSDDLRSQLENDFLHSLRDEVVEGGETEAIRPLLWYPGNFAWHSNFSRMQLRKNQTLERFHEFLKLENEIGNITRQEAVSMVPPLFLDVHSDHFVLDMCAAPGSKTFQLLEIIHQSSKTRSLPDGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRLNRNYERMELDNNISQLLFDRVLCDVPCSGDGTLRKAPDLWRKWNTGMGHGLHSLQVLIAMRGLSLLKIGGRMVYSTCSMNPIENEAVVAEVLRRCGGSVKLLDVSSELPQLIRRPGLRRWKVYDKGTWLVSYKDVPKYRRSVILSSMFPSGRGHHDLVDSSCSVDPEGVTNGINGNAGDGVQAVENPVMSESGAEVCDFPLERCMRIVPHDQNTGAFFIAVLQKVSPLPAITEQTKIKNDEQYVEPANQSLNDAQVPHITSSESAHEEVFKAVSEENVDDAEPNTEDLEVGPVTCEEQNSKETQEPDNVQNTAKRVPGKRKLQIQGKWRGVDPVVFFKDETIINSIRDFYGIDERFPFNGHLVTRNSDTNHVKRIYYISKSVKDVLELNFKVGQQLKITSIGLKMFERQTAREGSSASCAFRISSEGLPLILPYITKQILHASPADFKHILQNKEVKFEDFNDAEFGEKAANLLPGCCVVILHIGNTLAAESLQVDESTIAIGCWKGRARLSVMVTAMDCQELLERLLIRFDTEKGSSGHADKSSNDVQELNSINDGVKVTVS* 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1126 820 MobiDBLite consensus disorder prediction 553 568 - -
Gso8g1126 820 PRINTS RNA (C5-cytosine) methyltransferase signature 186 196 IPR023267 GO:0001510
Gso8g1126 820 PRINTS RNA (C5-cytosine) methyltransferase signature 276 288 IPR023267 GO:0001510
Gso8g1126 820 PRINTS RNA (C5-cytosine) methyltransferase signature 326 342 IPR023267 GO:0001510
Gso8g1126 820 PRINTS RNA (C5-cytosine) methyltransferase signature 464 481 IPR023267 GO:0001510
Gso8g1126 820 ProSiteProfiles SAM-dependent MTase RsmB/NOP-type domain profile. 71 482 IPR001678 GO:0008168
Gso8g1126 820 MobiDBLite consensus disorder prediction 29 44 - -
Gso8g1126 820 PANTHER TRNA (CYTOSINE(34)-C(5))-METHYLTRANSFERASE-RELATED 5 797 - -
Gso8g1126 820 MobiDBLite consensus disorder prediction 552 575 - -
Gso8g1126 820 PRINTS RNA (C5-cytosine) methyltransferase NCL1 subfamily signature 132 153 IPR023270 GO:0016428
Gso8g1126 820 PRINTS RNA (C5-cytosine) methyltransferase NCL1 subfamily signature 360 379 IPR023270 GO:0016428
Gso8g1126 820 PRINTS RNA (C5-cytosine) methyltransferase NCL1 subfamily signature 653 665 IPR023270 GO:0016428
Gso8g1126 820 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 53 482 IPR029063 -
Gso8g1126 820 Pfam 16S rRNA methyltransferase RsmB/F 176 352 IPR001678 GO:0008168
Gso8g1126 820 Gene3D Vaccinia Virus protein VP39 50 481 IPR029063 -
Gso8g1126 820 PANTHER NCL1 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING 5 797 IPR023267 GO:0001510
Gso8g1126 820 ProSitePatterns NOL1/NOP2/sun family signature. 275 286 IPR018314 GO:0003723|GO:0008168
Gso8g1126 820 MobiDBLite consensus disorder prediction 1 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1126 Gso-Chr8 10345358 10352285 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1126 K15334 - gmx:100808859 1643.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1496 5 38421364 38429020 Gso8g1126 8 10345358 10352285 GST
Gso8g1126 8 10345358 10352285 Gso18g0137 18 1158508 1162386 PCT
Gso8g1126 8 10345358 10352285 Gso13g1482 13 30318233 30326950 PCT