Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1107 ATGATGAAGTGTTTCTCGGTGTCCTTAGCCTCTTTATGGGTTCTCCTTGCTCTCTTTTCTCTGAGTGTGTCATCTCAAAATATATCTGAGAGTGGGCTACAGCAAGCTAGCCTCCCACCAAGAGGTTGGAATTCCTATGATTCCTTTTGCTGGACAATTTCTGAAGACGAATTTTTACAAAGTGCTGAAATGGTTTCTCAACGTCTCAAGGCTCACGGATATCAGTTTGTCGTGGTGGATTACCTCTGGTATAGGAAGAAAGTCAAGGGTGCTTACCCTGATTCTCTTGGATTTGACGTGATCGATGAATGGGGAAGGATGATCCCTGACCCAGGAAGGTGGCCTTCTTCCATAGGTGGGAAGGGATTCAGTGAAGTAGCTAATAAAGTACATAGTTTAGGTTTGAAGTTTGGGATTCACGTTATGAGAGGGATAAGCACGCAAGCTGTCAATGCAAACACCCCTATCCTAGATATAACAAAGGGAGGTGCTTATCAAGAATCTGGTCGAGTGTGGCATGCAAAAGACATAGCAATGCCAGAAAGGGCTTGTGCATGGATGCCTCACGGTTTCATGAGTGTAAATACGAAGTTGGGAGCTGGGAGAGCTTTTTTGAAATCCCTTTATGAGCAGTATGCTGCATGGGGTGTTGATCTCGTGAAACATGACTGTGTGTTTGGAGATGACTTGGATTTAAATGAAATAAGCTATGTGTCGGAGGTTCTCAGTGTGCTTAATCGCCCTATTGTGTATTCTCTGTCTCCCGGAACCAGTGTGACACCAGCCATGGCCAAGGATGTCAGTGGACTAGTCAACATGTATCGAATAACAGGAGATGACTGGGATAAATGGGAGGACGTCAAGGCTCATTTTGATGTAACAAGGGATTTTTCTACAGCTAATATGATAGGAGGGAAAGGTTTGAAGGGAAATTCCTGGCCTGATTTGGACATGCTACCATTTGGATGGCTAACTGATCCAGGATCAAATGAAGGTCCACACAGATTTAGTAAACTCACTCTAGAAGAAAAAAGGACACAGATGACTTTGTGGTCTTTGGCAAAGTCTCCCCTTATGTATGGGGGGGATGTGCGGAGGATCGATCCAACCACATACGAACTTATCACAAATCCTACCCTGCTAGAGATTAATTACTTTAGCTCAAACAATATGGAGTTTCCTTACATCACAAGCTCAATTAACTTGAAGCACCCTGGAGGGAAAGAAAGAAGACTTAAGAAAGGAATACATTCATTGGGTTTGACTAGCTGCAGTGAATCAAAGGCGAGGGGTTGGTCTATTGAAAGTCTTAACCAAGATCTTGAAAGAATCTGTTGGAAAAAGGGTTTAGAAAACAAGCATCAGGCCCCTTTCTGCGTACACAAAAGAGAACTTCAATTCAGATTAGACGGGGTGAGTATGTATCAAGAGGACTATCGAGGGAAACATCAATTAGTTGCAACTGACAGAATGAAATTTTGCTTGGACGCTTCTCCAAGACGAAAGGTTACTTCTAAAGAGTTCAAGAGAGGTACATTTTCTCCATGCAGATGGGATTCAAATCAGATCTGGGAACTGAACTCCAATGGGACCATGGTAAATAGTTACTCCGGTCTTTGTGCAACTGTAGAGTATATTGAAGCTAATGTTAATTCTGGTGGGATTCGCTCTTGGATCGCAACAGGAAGAACAGGGGAAATCTATCTTGCTTTCTTCAATCTAAGCGAACAGAAGACGGAGATATATGCAAAGACATCATATCTGGCTAAGGTTCTTCCTGACAAAAGCATCACTTCATGCAAGGGCGAGGAAGTGTGGAGTGGAACAGATGTAATAACAACGCAAGGGACGATATCAATGAACGTGGAAATTCATGGATGTGCACTATTTGTTCTAAATTGCAACTAG 1908 0.4287 MMKCFSVSLASLWVLLALFSLSVSSQNISESGLQQASLPPRGWNSYDSFCWTISEDEFLQSAEMVSQRLKAHGYQFVVVDYLWYRKKVKGAYPDSLGFDVIDEWGRMIPDPGRWPSSIGGKGFSEVANKVHSLGLKFGIHVMRGISTQAVNANTPILDITKGGAYQESGRVWHAKDIAMPERACAWMPHGFMSVNTKLGAGRAFLKSLYEQYAAWGVDLVKHDCVFGDDLDLNEISYVSEVLSVLNRPIVYSLSPGTSVTPAMAKDVSGLVNMYRITGDDWDKWEDVKAHFDVTRDFSTANMIGGKGLKGNSWPDLDMLPFGWLTDPGSNEGPHRFSKLTLEEKRTQMTLWSLAKSPLMYGGDVRRIDPTTYELITNPTLLEINYFSSNNMEFPYITSSINLKHPGGKERRLKKGIHSLGLTSCSESKARGWSIESLNQDLERICWKKGLENKHQAPFCVHKRELQFRLDGVSMYQEDYRGKHQLVATDRMKFCLDASPRRKVTSKEFKRGTFSPCRWDSNQIWELNSNGTMVNSYSGLCATVEYIEANVNSGGIRSWIATGRTGEIYLAFFNLSEQKTEIYAKTSYLAKVLPDKSITSCKGEEVWSGTDVITTQGTISMNVEIHGCALFVLNCN* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1107 635 PANTHER ALPHA-GALACTOSIDASE 7 632 - -
Gso8g1107 635 Gene3D - 548 634 IPR013780 -
Gso8g1107 635 PANTHER ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE 7 632 IPR002241 GO:0004553|GO:0005975
Gso8g1107 635 SUPERFAMILY Glycosyl hydrolase domain 551 633 - -
Gso8g1107 635 PRINTS Glycosyl hydrolase family 27 signature 33 52 IPR002241 GO:0004553|GO:0005975
Gso8g1107 635 PRINTS Glycosyl hydrolase family 27 signature 127 148 IPR002241 GO:0004553|GO:0005975
Gso8g1107 635 PRINTS Glycosyl hydrolase family 27 signature 342 363 IPR002241 GO:0004553|GO:0005975
Gso8g1107 635 CDD GH27 39 384 IPR002241 GO:0004553|GO:0005975
Gso8g1107 635 Pfam Alpha galactosidase C-terminal beta sandwich domain 553 632 IPR041233 -
Gso8g1107 635 Gene3D Aldolase class I 30 387 IPR013785 -
Gso8g1107 635 Pfam Alpha galactosidase A 52 147 IPR002241 GO:0004553|GO:0005975
Gso8g1107 635 Pfam Alpha galactosidase A 209 384 IPR002241 GO:0004553|GO:0005975
Gso8g1107 635 SUPERFAMILY Ricin B-like lectins 484 562 IPR035992 -
Gso8g1107 635 SUPERFAMILY (Trans)glycosidases 36 385 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1107 Gso-Chr8 10160513 10166147 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1107 14 464 Glycoside Hydrolase AT3G26380 67.174 0.0 651
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1107 - - gmx:100802840 1292.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1479 5 38220866 38226664 Gso8g1107 8 10160513 10166147 GST
Gso8g1107 8 10160513 10166147 Gso13g1502 13 30496517 30501701 PCT