Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0867 ATGGCCACCAACGAGGAGAGGGATATGGAGAACAAGAAGAGTGAGGAGGAAGAACTGAAGCATCTCGGGTTTGTGAAGATTGCGGCAATGAAAGCCTTAGTGTGTGTGTCGAATCTCTACGGCTTCGCAAAGCAAAACTCGGGACTTTTGAGATCTGCTGTTGGAACCGTGGAAGACACTGTAACCACCGTTCTGGGTCCCGTCTACCACAAATTCAACGCTGTTCCCAACCACATCCTCCTTTTTGTCGACAACAAGGTGGATGAAGCTGCTCACAAATTCGATGAGCATGCACCTTCTTTGGCCAAGCAGGTTGCAAGCCAAGTCACTTGTTTGGTTCAGGAAGTGACACACAAAGCTGAGAAAGTAGTGAGTGAAGCTCAATCTGGAGGGGCACGAGCAGCAGCAAATTATGTAGCCACTGAGTCCAAGCAAATTGTGCTCTTTGGTTCAGTGAAATTGTGGACTGGTCTCAACCACTATCCACCATTCCATGCAGTGGCTGAGATGGCAGTTCCCACAGCTGCACACTGGTCAGAAAAATACAACAATGTGGTCAAGGGAACAAGTGAGAAGGGTTATGCCGTGTTTGACTATTTGCCTCTGATTCCAATTGATGACATTGCTAAGGCGTTTAAACACGGAGAAGGCAATGTGAATGAAGATGAAGCATGTTCCGTGGGAGACTGTTCTTAG 696 0.4756 MATNEERDMENKKSEEEELKHLGFVKIAAMKALVCVSNLYGFAKQNSGLLRSAVGTVEDTVTTVLGPVYHKFNAVPNHILLFVDNKVDEAAHKFDEHAPSLAKQVASQVTCLVQEVTHKAEKVVSEAQSGGARAAANYVATESKQIVLFGSVKLWTGLNHYPPFHAVAEMAVPTAAHWSEKYNNVVKGTSEKGYAVFDYLPLIPIDDIAKAFKHGEGNVNEDEACSVGDCS* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0867 231 PANTHER REF/SRPP-LIKE PROTEIN OS05G0151300/LOC_OS05G05940 8 223 IPR008802 -
Gso8g0867 231 Coils Coil 2 22 - -
Gso8g0867 231 PANTHER RUBBER ELONGATION FACTOR PROTEIN 8 223 - -
Gso8g0867 231 Pfam Rubber elongation factor protein (REF) 14 213 IPR008802 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0867 Gso-Chr8 8051965 8053725 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0867 - - gmx:100500275 459.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1251 5 36061608 36063658 Gso8g0867 8 8051965 8053725 GST
Gso18g0057 18 500877 502824 Gso8g0867 8 8051965 8053725 PCT
Gso13g1564 13 30975802 30977996 Gso8g0867 8 8051965 8053725 PCT
Gso8g0867 8 8051965 8053725 Gso18g0057 18 500877 502824 PCT
Gso8g0867 8 8051965 8053725 Gso13g1564 13 30975802 30977996 PCT