Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0057 ATGGCAAAGACCGAGTTAGAGGTGACTGTTGAGAGCAAGAACAAAGACCTCAAGCACCTGGGGTTTGTGAGGATTGCTGCTATTCAAACATTTGTGATTGTGTCAAATCTGTATGAGTACGCAAAGCAGAATTCTGGGCCTTTGAGATCCGTTGTAGGAACGGTTGAGAACACTGTAACCACCATTCTCGGTCCTGTCTGCAACAAATTCAAGGACGTCCCTGATGATGTCCTTGTTTTTGTTGACAAAAAGGTGGATGAAGCTTCCCACAAGTTCGATGAGCACGCTCCTCCTTTTGCTAAACACATTGCGGATCAAGCCAAGGGTGTGATTCAGAAAGTGACTTGTGAGGCAGGGAAAGTAGCAAGTGAAGCACAATCTGGGGGGCCAAGAGCAGCTGTTCATTATGTTGCTACAGAATCAAAGCATTTTGTGTTGATAAATTCAGTAAAGTTGTGGAATGGACTCAACCACTATCCACCATTCCATGCACTGTCAGAGATGGCAATTCCCACTGTTGCTCACTGGTCAGAGAAGTACAACCATGTGATCAAGGCCATGACTCAAAAGGGTTACAGTTTCGTTGGGTATCTACCTTTGATTCCCATTGAAGAGATAGCCAAGGCATTCAAGCAGGGAGAGGCTAACTTGAAAGGAGATAATGCAGCCTCTGAGGAACAGAGATCAGAATCATCTGATTCTGATTAA 708 0.4477 MAKTELEVTVESKNKDLKHLGFVRIAAIQTFVIVSNLYEYAKQNSGPLRSVVGTVENTVTTILGPVCNKFKDVPDDVLVFVDKKVDEASHKFDEHAPPFAKHIADQAKGVIQKVTCEAGKVASEAQSGGPRAAVHYVATESKHFVLINSVKLWNGLNHYPPFHALSEMAIPTVAHWSEKYNHVIKAMTQKGYSFVGYLPLIPIEEIAKAFKQGEANLKGDNAASEEQRSESSDSD* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0057 235 PANTHER REF/SRPP-LIKE PROTEIN OS05G0151300/LOC_OS05G05940 1 235 IPR008802 -
Gso18g0057 235 Pfam Rubber elongation factor protein (REF) 12 212 IPR008802 -
Gso18g0057 235 PANTHER RUBBER ELONGATION FACTOR-RELATED 1 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0057 Gso-Chr18 500877 502824 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0057 - - gmx:100816931 436.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0057 18 500877 502824 Gso13g1564 13 30975802 30977996 GST
Gso18g0057 18 500877 502824 Gso5g1251 5 36061608 36063658 PCT
Gso18g0057 18 500877 502824 Gso8g0867 8 8051965 8053725 PCT
Gso5g1251 5 36061608 36063658 Gso18g0057 18 500877 502824 PCT
Gso8g0867 8 8051965 8053725 Gso18g0057 18 500877 502824 PCT