Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1564 ATGGCAAAGACTGAGTTAGAGGTGACTGTTGAGAGCAAGAACAAAGAACTAAAGCACCTGGGATTTGTGAGGATTGCTGCTATTCAAACTTTTGTGATTGTGTCAAATCTGTATGAGTACGCAAAGCAGAATTCTGGGCCTTTGAGATCCGCTGTTGGAACGGTTGAGAACACTGTAACCACCGTTCTTGGTCCTGTCTGCAACAAATTCAAGGACTTCCCTGATGATGTCCTGGTTTATGTTGACAAAAAGGTGGATGAAGCTTCCCACAAGTTCGATGAGCATGCTCCTTCCTTTGCCAAGCACCTTGCGGATCAAGCCAAGGGTGTGATTCAGAAAGTGACTTGTGAGGCAGGGAAAGTTGCAAGTGAAGCTCAATCTGGGGGGTCAAGAGCTGCTGTTCATTTTGTTGCTACAGAGTCAAAGCATTTTGTGTTGATAAATTCGGTGAAGTTGTGGAATGGACTCACCCACTATCCACCATTCCATGCATTGGCAGAGATAGCAGTTCCCACTGCTGCTCACTGGTCAGAGAAGTACAACCATGTGATCAAGGCCATGACTCAAAAGGGTTATAGTTTCATCGGGTATCTACCTTTGATTCCCATTGAAGAGATAGCCAAGGCATTCAAACAGGGAGAGGCGAACTTAAAAGGAGATAATGCAGCCTCTGAGGAACAAAGATTAGAATCTGCATCTGATTCTGATTAA 711 0.4473 MAKTELEVTVESKNKELKHLGFVRIAAIQTFVIVSNLYEYAKQNSGPLRSAVGTVENTVTTVLGPVCNKFKDFPDDVLVYVDKKVDEASHKFDEHAPSFAKHLADQAKGVIQKVTCEAGKVASEAQSGGSRAAVHFVATESKHFVLINSVKLWNGLTHYPPFHALAEIAVPTAAHWSEKYNHVIKAMTQKGYSFIGYLPLIPIEEIAKAFKQGEANLKGDNAASEEQRLESASDSD* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1564 236 PANTHER REF/SRPP-LIKE PROTEIN OS05G0151300/LOC_OS05G05940 1 236 IPR008802 -
Gso13g1564 236 Pfam Rubber elongation factor protein (REF) 12 212 IPR008802 -
Gso13g1564 236 PANTHER RUBBER ELONGATION FACTOR-RELATED 1 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1564 Gso-Chr13 30975802 30977996 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1564 - - gmx:112935895 465.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0057 18 500877 502824 Gso13g1564 13 30975802 30977996 GST
Gso13g1564 13 30975802 30977996 Gso5g1251 5 36061608 36063658 PCT
Gso13g1564 13 30975802 30977996 Gso8g0867 8 8051965 8053725 PCT
Gso5g1251 5 36061608 36063658 Gso13g1564 13 30975802 30977996 PCT
Gso8g0867 8 8051965 8053725 Gso13g1564 13 30975802 30977996 PCT