Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0098 ATGACGTGTAGCAGTGGCATTGGCCCCATTCGAATCGGCTTAAAGTTCTGCTCTCCCACGTTCAGCCAACGTTCCTTCTCTCTTTCTCTTCTCACCGGCTGGTCACCGGCTTCTTTCATTCTCCGACCGCCCCTACCCCCTTCATTCCCGATTGCTTCGTTCGGGAACATGTCCAGTCACGCTGCTTCTTCTTTAAGGACCGCTTCCTTCTGCAATAGCCCCACGCGCCCCAAGAACAAAGCCTATGCCTCTGACCATTCAACGCCTCACTTCATTGCTCGTAAAACCTTTTCCTCACCGCGCACCATGAAAGAGAGAACTGTGAAATCATTGCGGCTTTCAAAGGCATTGACAGTTCCTGAAACAACAACCGTCTATGAAGCTTGCCGTAGAATGGCTGCTCGCAAAGTAGATGCTCTGTTACTCACTGATTCCAATGCTTTGCTCTGTGGAATCCTCACAGACAAGGATATAGCAACAAGAGTTATTGCTCGTGAGGTTAATCTCGAAGAAACACATGTTTCCAAGGTTATGACAAGGAATCCAGTATTTGTCCTTTCTGACGCTCTTGCTGTTGAAGCCCTCCAAAAGATGGTGCAAGGGAGGTTCAGACATTTACCAGTGGTGGAGAATGGAGAAGTTGTTGCCATACTTGACATAGCAAAGTGTTTGTATGATGCCATTGCCCGTATGGAAAGGAAAGCTGAGAAAGGAAAGGCAATTGCGGCAGCAGTTGAAGGTATCGAAAAACACTGGGGAACATCTACTCCTGGCTCCAATTCGACATTCATGGAGACTCTTCGGGAGCAGATATTTAAGCCATCTTTGTCTACAATTATTCCTCAGAATTCAAAGGTTGTAACAGTTTCACCAACAGACTCAGTTTTGACGACAACAAAGAAGATGCTTGAACTTCGTGCAAGTTCAGCTGTTGTGACGGTTGGTGACAAACTTTGTGGTATTCTTACTTCAAAGGATATCTTGATGCGGGTAATAGCACAGAGTCTTCCTCCATCGTCAACTCTTGTTGAGAAGGTCATGACTCCAAATCCAGAATGTGGAACAATTGATACACCAATAATCGATGCACTTCACACTATGCATGACGGAAATTTTTTGCATCTTCTTGTGGTTAATAGAGATGGCATTGTTGTTGCTACGGTTGATGCGATTCATATCACGCATGCTGCTGTGGCGACAGCTAGTCAGGTCGGAAATACTCCCAATTTTAACAACGAAGCTGCCAACTCCATGATACAAAAAATTTGGGATTCGGCCATGGCCTTAGCTCCAAATGAGGAGGAAGAGGATTCACAAAGCGAGACTTCCTTGAAAATGATTTCTGAGGGAGGAGAAACAGGAAGATCCATTTCTTATCTTGCGTCAAGCATGCAGAACGCATTTTCCTTCAAATTACAAGACAGGAAGGGCAGATTGCATAGGTTCACATGCGATACTCGGAGCTTGGCAGAGGTTATAACGTCCGTCATTCAGAGAGTCGGTGATGATATTGACCCCATGGACCTGCCCCAAATTTTGTATGAAGATGAAGAAAATGATAAAGTTGTACTGGCTTCGGACAGTGATCTTGCTGCAGCTGTGGACCACGCAAAGACGGCTGGTTTGAAGGGACTGAGATTGCATTTAGACTACTCTGGAACACATGGTTATGGAACTGATTCAAGTTCATTAAGTTGGAAATATGCTAATTCAGAAGCATGGGCATCTGCATACAGTGCCATTGCTGCTGGAGCTGCAGTTGTTGCTGCCTTAGGTCTATTGGCGTTTGTGAGGCGAAGTCAATGA 1806 0.4546 MTCSSGIGPIRIGLKFCSPTFSQRSFSLSLLTGWSPASFILRPPLPPSFPIASFGNMSSHAASSLRTASFCNSPTRPKNKAYASDHSTPHFIARKTFSSPRTMKERTVKSLRLSKALTVPETTTVYEACRRMAARKVDALLLTDSNALLCGILTDKDIATRVIAREVNLEETHVSKVMTRNPVFVLSDALAVEALQKMVQGRFRHLPVVENGEVVAILDIAKCLYDAIARMERKAEKGKAIAAAVEGIEKHWGTSTPGSNSTFMETLREQIFKPSLSTIIPQNSKVVTVSPTDSVLTTTKKMLELRASSAVVTVGDKLCGILTSKDILMRVIAQSLPPSSTLVEKVMTPNPECGTIDTPIIDALHTMHDGNFLHLLVVNRDGIVVATVDAIHITHAAVATASQVGNTPNFNNEAANSMIQKIWDSAMALAPNEEEEDSQSETSLKMISEGGETGRSISYLASSMQNAFSFKLQDRKGRLHRFTCDTRSLAEVITSVIQRVGDDIDPMDLPQILYEDEENDKVVLASDSDLAAAVDHAKTAGLKGLRLHLDYSGTHGYGTDSSSLSWKYANSEAWASAYSAIAAGAAVVAALGLLAFVRRSQ* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0098 601 SUPERFAMILY CAD & PB1 domains 460 557 - -
Gso8g0098 601 Pfam CBS domain 174 218 IPR000644 -
Gso8g0098 601 Pfam CBS domain 283 329 IPR000644 -
Gso8g0098 601 Pfam CBS domain 114 160 IPR000644 -
Gso8g0098 601 ProSiteProfiles CBS domain profile. 178 236 IPR000644 -
Gso8g0098 601 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 86 589 - -
Gso8g0098 601 Gene3D - 272 412 IPR046342 -
Gso8g0098 601 CDD CBS_pair_MUG70_2 283 399 - -
Gso8g0098 601 PANTHER CBS DOMAIN-CONTAINING PROTEIN CBSCBSPB4-RELATED 86 589 IPR034896 -
Gso8g0098 601 SMART cbs_1 350 398 IPR000644 -
Gso8g0098 601 SMART cbs_1 181 225 IPR000644 -
Gso8g0098 601 SMART cbs_1 285 332 IPR000644 -
Gso8g0098 601 SMART cbs_1 115 163 IPR000644 -
Gso8g0098 601 CDD CBS_pair_MUG70_1 113 229 - -
Gso8g0098 601 ProSiteProfiles CBS domain profile. 112 171 IPR000644 -
Gso8g0098 601 SMART PB1_new 467 552 IPR000270 GO:0005515
Gso8g0098 601 SUPERFAMILY CBS-domain pair 284 396 IPR046342 -
Gso8g0098 601 Pfam PB1 domain 468 550 IPR000270 GO:0005515
Gso8g0098 601 Gene3D - 83 243 IPR046342 -
Gso8g0098 601 ProSiteProfiles CBS domain profile. 279 339 IPR000644 -
Gso8g0098 601 SUPERFAMILY CBS-domain pair 105 222 IPR046342 -
Gso8g0098 601 ProSiteProfiles CBS domain profile. 347 404 IPR000644 -
Gso8g0098 601 CDD PB1_MUG70 468 552 - -
Gso8g0098 601 ProSiteProfiles PB1 domain profile. 465 552 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0098 Gso-Chr8 944802 950279 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0098 - - gmx:100805867 1115.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1738 5 40690823 40696312 Gso8g0098 8 944802 950279 GST
Gso4g1662 4 46452860 46459886 Gso8g0098 8 944802 950279 PCT