Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1738 ATGTTCCTTCTCGATCTCTCTTTCTCTTCTCACCGGCTGGTCACCGGCTTCTCTCATTCTCCGACCGTCCCCACCCCCTTCATTCCCGATTCGTTCGTCTTCGCTGCTTCGCGTCAACACTTTTCTTCTCTTCTAGTTAAGGTAGTGTTCGGGAAGATGTCGAGTCACGGTGGTTCTTCTTTAAGGAACGGTTCCTTGTCCAATAGCCCCACGCGGGCCAAGAAGAAAGCCTTTGGCTCTGAGCATTCAACGCCTGACTTTATTGCTCGTAAAACCTTTACCTCACCGCGCACCATGGGAGAGAGAACTGTGAAATCATTGCGGCTTTCAAAGGCATTGACAGTTCCTGAAACAACAACCGTCTATGAAGCTTGCCGTAGGATGGCTGCTCGCAAAGTTGATGCTCTATTACTAACTGATTCTAATGCTTTGCTCTGTGGAATCCTCACAGACAAGGATATAGCAACAAGAGTTATTGCTCGTGAAGTTAATCTCGAAGAAACACCTGTTTCCAAGGTTATGACAAGGAATCCAGTATTTGTCCTTTCTGATACTCGTGCTGTGGAAGCCCTCCAAAAGATGGTGCAAGGGAGGTTCAGACATTTACCTGTGGTGGAGAATGGAGAAGTAGTTGCCATACTTGACATAGCAAAGTGTTTGTATGATGCCATTGCCCGTATGGAAAGGGCAGCTGAGAAAGGAAAGGCAATTGCGGCAGCAGTTGAAGGTATCGAAAAACACTGGGGAACATCTACTCCTGCCTCCAATTCGACATTCATGGAGACTCTTCGCGAGCAGATATTTAAGCCATCTTTGTCTACAATTATTCCTGAGAATTCAAAGGTTGTAACAGTTTCACCAACAGACTCGGTTTTGACTACAACAAAGAAGATGCTTGAACTTCGTGCAAGTTCAGCTGTTGTGACGATTGATGACAAACCTTGTGGTATTCTTACTTCAAAGGATATCTTGATGCGGGTAATAGCACAGAGTCTTCCTCCATCGTCAACTCTTGTTGAGAAGGTCATGACTCCAAATCCAGAATGTGGAACAATTGATACACCAATAGTCGATGCACTTCACACTATGCATGACGGAAAATTTTTGCATCTTCCTGTGGTTAATAGAGGTGGCATTGTTGTTGCTACGGTTGATGTGATTCATATCACGCATGCGGCTGTGGCGACAGCTAGTCAGGTCGGAAATACGCCCAATTTTAACAACGAAGCTGCCAACTCCATGATACAAAAATTTTGGGATTCGGCCATGGCCTTAGCTCCAAATGAGGAGGATGAGGATTCACAAAGCGAGGCTTCCTTGAAAATGATTTCCGAGGGAGGAGAAACAGGGAGATCCATTTCTTATCTTACGTCAAGCATGCAGAACGTATTTTCGTTCAAATTACAAGACAGGAAGGGCAGATTGCATAGGTTCACATGCGATACTCGGAGCTTGGCAGAGGTTATAACTTCCATCGTTCAGAGAGTCGGTGATGATATTGACCCCATGAACCTGCCCCAAATTTTGTATGAAGATGAAGACAATGATAAAGTTGTACTGGCTTCGGACAGTGATCTTGCTGCAGCTGTGGACCACGCGAAGACGGCTGGTTTGAAGGGATTGAGATTGCATTTAGACTACTCTGGAACACATGGTTATGGAACTGATTCAAGTTCAGTAAGTTGGAAATATGCTAATTCAGAAGCATGGGCATCGGCATACAGTGCCATTGCTGCTGGAGCTGCAGTTGTTGCTGCCTTAGGTCTATTGGCGTTTGTGAGGCGAAGTCGATGA 1794 0.4548 MFLLDLSFSSHRLVTGFSHSPTVPTPFIPDSFVFAASRQHFSSLLVKVVFGKMSSHGGSSLRNGSLSNSPTRAKKKAFGSEHSTPDFIARKTFTSPRTMGERTVKSLRLSKALTVPETTTVYEACRRMAARKVDALLLTDSNALLCGILTDKDIATRVIAREVNLEETPVSKVMTRNPVFVLSDTRAVEALQKMVQGRFRHLPVVENGEVVAILDIAKCLYDAIARMERAAEKGKAIAAAVEGIEKHWGTSTPASNSTFMETLREQIFKPSLSTIIPENSKVVTVSPTDSVLTTTKKMLELRASSAVVTIDDKPCGILTSKDILMRVIAQSLPPSSTLVEKVMTPNPECGTIDTPIVDALHTMHDGKFLHLPVVNRGGIVVATVDVIHITHAAVATASQVGNTPNFNNEAANSMIQKFWDSAMALAPNEEDEDSQSEASLKMISEGGETGRSISYLTSSMQNVFSFKLQDRKGRLHRFTCDTRSLAEVITSIVQRVGDDIDPMNLPQILYEDEDNDKVVLASDSDLAAAVDHAKTAGLKGLRLHLDYSGTHGYGTDSSSVSWKYANSEAWASAYSAIAAGAAVVAALGLLAFVRRSR* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1738 597 Gene3D - 268 408 IPR046342 -
Gso5g1738 597 ProSiteProfiles CBS domain profile. 343 400 IPR000644 -
Gso5g1738 597 CDD CBS_pair_MUG70_2 279 395 - -
Gso5g1738 597 Pfam PB1 domain 465 546 IPR000270 GO:0005515
Gso5g1738 597 SUPERFAMILY CBS-domain pair 101 217 IPR046342 -
Gso5g1738 597 PANTHER CBS DOMAIN-CONTAINING PROTEIN CBSCBSPB4-RELATED 82 585 IPR034896 -
Gso5g1738 597 Gene3D - 474 545 - -
Gso5g1738 597 CDD CBS_pair_MUG70_1 109 225 - -
Gso5g1738 597 SMART PB1_new 463 548 IPR000270 GO:0005515
Gso5g1738 597 SUPERFAMILY CBS-domain pair 280 392 IPR046342 -
Gso5g1738 597 Gene3D - 86 239 IPR046342 -
Gso5g1738 597 SUPERFAMILY CAD & PB1 domains 456 553 - -
Gso5g1738 597 ProSiteProfiles CBS domain profile. 108 167 IPR000644 -
Gso5g1738 597 ProSiteProfiles CBS domain profile. 275 335 IPR000644 -
Gso5g1738 597 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 82 585 - -
Gso5g1738 597 SMART cbs_1 177 221 IPR000644 -
Gso5g1738 597 SMART cbs_1 281 328 IPR000644 -
Gso5g1738 597 SMART cbs_1 111 159 IPR000644 -
Gso5g1738 597 SMART cbs_1 346 394 IPR000644 -
Gso5g1738 597 MobiDBLite consensus disorder prediction 56 74 - -
Gso5g1738 597 MobiDBLite consensus disorder prediction 56 81 - -
Gso5g1738 597 CDD PB1_MUG70 464 548 - -
Gso5g1738 597 ProSiteProfiles PB1 domain profile. 461 548 IPR000270 GO:0005515
Gso5g1738 597 ProSiteProfiles CBS domain profile. 174 232 IPR000644 -
Gso5g1738 597 Pfam CBS domain 110 156 IPR000644 -
Gso5g1738 597 Pfam CBS domain 339 389 IPR000644 -
Gso5g1738 597 Pfam CBS domain 279 325 IPR000644 -
Gso5g1738 597 Pfam CBS domain 170 214 IPR000644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1738 Gso-Chr5 40690823 40696312 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1738 - - gmx:100783514 1085.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1738 5 40690823 40696312 Gso8g0098 8 944802 950279 GST
Gso4g1662 4 46452860 46459886 Gso5g1738 5 40690823 40696312 PCT