Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0041 ATGGCAGCTCTGGTCAACGCTGCAACAAGTGAGAAACTGGCTGAAACTGATTGGATGAAAAATATTGAAATCTGTGAATTAGTAGCTCATGATCAAAGGCAAGCTAGAGATGTTATTAAAGCTATAAAAAAGAGGCTGGGTAACAAGAATCCTAACATTCAACTTTATGCAGTTGTGTTGCTGGAAATGTTGATGAACAATATTGGAGATCTTGTTCACCAGCTGGTGATTGATACAGGAATTATTCCTATTCTTGTGAAAATTGTGAAGAAAAAATCAGATTTGCCTGTAAGGGAGCGGATATTTCTCCTACTAGATGCCACACAAACATCCCTAGGTGGCGCTTCTGGAAAGTTTCCACAATATTATAATGCATATTATGATTTGGTGAGTGCTGGAGTGCAGTTTCCTCAAAGGGATCAAGTGACTCAACCAAGTCGTCCTCATTCACAACTTAATGGGATTAACTATGTACAAAACAGGGAGCAGGCCCCGCCTAGACATCAGCAAGCAGAATCCCAAACTGTTCCTGAATCTAGCATTATTCAAAAGGCTAGTAATGCATTAGAAGTTTTAAAAGAAGTCCTTGATGCTATTAATGCCCAGCATCCTCAGGCTGCAAGAGATGAATTCACCCTTGACCTTGTTGAACAATGTTCATTTCAGAAGCAAAGGGTAATGCATCTTGTGATGGCTTCTCGAGATGAGAGTATAGTTTCTCGAGCAATAGAATTAAACGAGCAACTTCAGAAAGTTCTTGCAAGACATGATAGCCTTCTTTCGGGCAGACCCACAACAATAGCTAATCATTTGGAGTGTGAAGAAGCAGAGGAGGAAGAAGAACCAGAACAGTTATTCCGGCGATTAAGCAAAGGAAAGGCTTGTGCAAGGCCTGAAGATGAAGAAAGAGAATCTGAGTTTCCTCACTTGGGTTTGCTTGAAGAGAGACTCAACTGGCCGTTAATAAGACCGATATCTTTGGAGCCATCTCGAGAAGCTAATACTTATCCTGCGCCTGCTGTGATGCCTCCTCACATGGCAATTCCACCACCGCCTTCAAAGCACATTGAGAGGGAGAGATATTTTCAAGAAAATAAAAAGGATGGTGCTACTTTAGCTGGCCACTTGAGAGGCCTCTCCTTACATAGTCACAATGGCAGCAGCTCTCACAGTGGAAGCTTTGATTTTAGTGATTGA 1197 0.4177 MAALVNAATSEKLAETDWMKNIEICELVAHDQRQARDVIKAIKKRLGNKNPNIQLYAVVLLEMLMNNIGDLVHQLVIDTGIIPILVKIVKKKSDLPVRERIFLLLDATQTSLGGASGKFPQYYNAYYDLVSAGVQFPQRDQVTQPSRPHSQLNGINYVQNREQAPPRHQQAESQTVPESSIIQKASNALEVLKEVLDAINAQHPQAARDEFTLDLVEQCSFQKQRVMHLVMASRDESIVSRAIELNEQLQKVLARHDSLLSGRPTTIANHLECEEAEEEEEPEQLFRRLSKGKACARPEDEERESEFPHLGLLEERLNWPLIRPISLEPSREANTYPAPAVMPPHMAIPPPPSKHIERERYFQENKKDGATLAGHLRGLSLHSHNGSSSHSGSFDFSD* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0041 398 Pfam GAT domain 187 262 IPR004152 GO:0035091|GO:0043130
Gso8g0041 398 Gene3D - 1 135 IPR008942 -
Gso8g0041 398 ProSiteProfiles GAT domain profile. 173 261 IPR004152 GO:0035091|GO:0043130
Gso8g0041 398 SUPERFAMILY GAT-like domain 175 263 - -
Gso8g0041 398 Coils Coil 182 202 - -
Gso8g0041 398 Gene3D - 171 268 IPR038425 -
Gso8g0041 398 ProSiteProfiles VHS domain profile. 8 137 IPR002014 GO:0035091|GO:0043130
Gso8g0041 398 PANTHER TOM1-LIKE PROTEIN 1 398 IPR044836 GO:0035091|GO:0043130|GO:0043328
Gso8g0041 398 SMART VHS_2 1 133 IPR002014 GO:0035091|GO:0043130
Gso8g0041 398 PANTHER ENTH/VHS/GAT FAMILY PROTEIN 1 398 - -
Gso8g0041 398 Pfam VHS domain 3 110 IPR002014 GO:0035091|GO:0043130
Gso8g0041 398 CDD VHS 1 129 - -
Gso8g0041 398 MobiDBLite consensus disorder prediction 363 398 - -
Gso8g0041 398 SUPERFAMILY ENTH/VHS domain 3 139 IPR008942 -
Gso8g0041 398 MobiDBLite consensus disorder prediction 381 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0041 Gso-Chr8 386262 392097 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0041 - - gmx:100790484 693.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1679 5 40075947 40081781 Gso8g0041 8 386262 392097 GST
Gso8g0041 8 386262 392097 Gso6g1349 6 13263162 13269869 PCT
Gso6g1349 6 13263162 13269869 Gso8g0041 8 386262 392097 PCT