Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1679 ATGCTGAAGCTCTCTGAGAAAAAGATGGCAGCTCTGGTCAATGCTGCAACAAGTGAGAAACTGGCTGAAACTGACTGGATGAAAAATATTGAAATCTGTGAATTAGTTGCTCATGATCAAAGGCAAGCTAGAGATGTTGTTAAAGCTATAAAAAAGAGGCTGGGTAACAAGAACCCAAACATTCAACTTTATGCTGTCGCGTTGCTGGAAATGTTGATGAACAATATTGGAGATCGTGTTCACCAGCAGGTGATTGATACAGGAATTATTCCTATTCTTGTGAAAATTGTGAAGAAAAAATCAGATTTGCCTGTAAGGGAGCGGATATTTCTCCTATTAGATGCCACACAAACATCCCTTGGTGGTGCTTCTGGAAAGTTTCCACAGTATTATAATGCATATTATGATTTGGTGAGTGCTGGGGTGCAGTTTCCTCAAAGGGATCAAGTGACCCAATCAAATCGTCCCCGTTCACAACTTAATGGGATTAACAATGTACCGAACAGGGAGCAGGTCCCGCCTAGACATCAGCAAGCAGAGTCCCAAACTGTTCCTGAATCTAGCATTATTCAAAAGGCTAGTAATGCATTAGAAGTTTTAAAAGAAGTCCTTGATGCTATCGATGCCCAACATCCTCAGGCTGCAAGAGATGAATTCACCCTTGACCTTGTTGAACAATCTTCATTTCAGAAGCAAAGGGTAATGCATCTTGTGATGGCTTCTCGAGATGAGAGGATAGTTTCTCGAGCAATTGAATTAAATGAGCAACTTCAGAAAGTTCTTGCAAGACATGATAGCCTTCTTTCGGGCAGGCCCACAACAATAGCTAATCATTTGGAGTGTGAAGAAGCTGAGGATGAGGAGGAAGAACCAGAACAGTTATTCCGGAGATTACGCAAAGGAAAGGCTTGTGCAAGGCCTGAAGATGAAGAAAGAGAACCTGAGTTTCCTCACTTGTGTTTTCTGGAAGAGAGACTCAACCGGCCGTTAATAAGACCACTATCTTTGGAGCCATCTCGAGAAGCTAATACTTATTCTGCACCTGCTGTGATTCCTCCTCACATGGCAATTCCACCACCGCCTTCAAAGCACATTGAGAGGGAGAGATATTTTCAGGAAAATAAAAAGGACGGTGCTACTTTGGCTGGCCACTTGAGAGGCCTCTCCTTACATAGTCACAATGGCAGCAGCTCTCACAGTGGAAGCTTTGATTTTAGTGATTGA 1224 0.4273 MLKLSEKKMAALVNAATSEKLAETDWMKNIEICELVAHDQRQARDVVKAIKKRLGNKNPNIQLYAVALLEMLMNNIGDRVHQQVIDTGIIPILVKIVKKKSDLPVRERIFLLLDATQTSLGGASGKFPQYYNAYYDLVSAGVQFPQRDQVTQSNRPRSQLNGINNVPNREQVPPRHQQAESQTVPESSIIQKASNALEVLKEVLDAIDAQHPQAARDEFTLDLVEQSSFQKQRVMHLVMASRDERIVSRAIELNEQLQKVLARHDSLLSGRPTTIANHLECEEAEDEEEEPEQLFRRLRKGKACARPEDEEREPEFPHLCFLEERLNRPLIRPLSLEPSREANTYSAPAVIPPHMAIPPPPSKHIERERYFQENKKDGATLAGHLRGLSLHSHNGSSSHSGSFDFSD* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1679 407 Coils Coil 190 210 - -
Gso5g1679 407 MobiDBLite consensus disorder prediction 147 187 - -
Gso5g1679 407 Gene3D - 179 277 IPR038425 -
Gso5g1679 407 MobiDBLite consensus disorder prediction 372 407 - -
Gso5g1679 407 SUPERFAMILY ENTH/VHS domain 10 147 IPR008942 -
Gso5g1679 407 SMART VHS_2 9 141 IPR002014 GO:0035091|GO:0043130
Gso5g1679 407 PANTHER ENTH/VHS/GAT FAMILY PROTEIN 9 407 - -
Gso5g1679 407 PANTHER TOM1-LIKE PROTEIN 9 407 IPR044836 GO:0035091|GO:0043130|GO:0043328
Gso5g1679 407 MobiDBLite consensus disorder prediction 390 407 - -
Gso5g1679 407 SUPERFAMILY GAT-like domain 186 271 - -
Gso5g1679 407 Pfam GAT domain 195 270 IPR004152 GO:0035091|GO:0043130
Gso5g1679 407 Gene3D - 2 143 IPR008942 -
Gso5g1679 407 ProSiteProfiles VHS domain profile. 16 145 IPR002014 GO:0035091|GO:0043130
Gso5g1679 407 CDD VHS 9 137 - -
Gso5g1679 407 Pfam VHS domain 6 118 IPR002014 GO:0035091|GO:0043130
Gso5g1679 407 ProSiteProfiles GAT domain profile. 181 269 IPR004152 GO:0035091|GO:0043130
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1679 Gso-Chr5 40075947 40081781 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1679 - - gmx:100802949 691.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1679 5 40075947 40081781 Gso5g1679 5 40075947 40081781 ECH
Gso5g1679 5 40075947 40081781 Gso8g0041 8 386262 392097 GST
Gso5g1679 5 40075947 40081781 Gso6g1349 6 13263162 13269869 PCT
Gso6g1349 6 13263162 13269869 Gso5g1679 5 40075947 40081781 PCT