Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g2110 ATGGAAGCCAATACTGAGTTCGAGGAAGGAGAGGCTTTCTTCTGTTATAAGGATGATGATGACGACAACATTGACCTTGATTCTCTCTCTTACATTGATGAGAGGATTCAGCATGCTCTGGGTCATTTTCGAAAGGAATTTGAAGAAGGTATCTCTGCTGACCGTTTGGGTGCAAAATTTGGTGACTATGGCTCCTTTTTACCTACCTGTGAACGCTCTCCTCCTTTGCGATCTTGTCCAAAGACTCCACAAAAACACAGTAGTTCCCCAAAATCTCCTAGCAATCTCCACATGGTGGCTGCATTTCAGAACTCAAAAGCACCTCCAAATATACCACCTTCTATGAGGCTTGGAACTGCTTCCTATAAAGCTCCTCCATTTCGTAATATAAGAGTACCTTCAGCGGATAACTCAGTAAAGAACACAGATATTTCCTCCAATGAAGTAATAGAGAAGTTCACTTTGAAAGACTGTGCAAATAAGTCAGAAAATTTGACTGACCAAAGAACACTGAAGTTGCGAATCAAAGTGAAATCAGATATCTTAGCAAAAAAGAAGGCAGTGATTTACAGTGGTCTTGGACTCGATGACTCTCCATCTTCATCAATGGAGAACAGCCATGAGGAAAGTGAAGATATGCCACATGTATCTCAAGAAACCCCTGAAGAATCTCCAACTAGCATTGTTCAGGTTATGATTTCTTTCACTATCCCTGGAGGTGTGCTAATATCACCTCTACATGACAGTCTCCTCTACTTGATAAGAAAGGAAAAAGCTCATGGAAACATCAAACCCATGTATTCTCTTAATGGTCATCAAGAACATTATTCCATGTCTACTGATGAATCAGATTCTTTTGTGGGGGATGGACATTTGTTGAAGAAAAGGAAGGTGACAGTGGTGGACCAAAGTGACAAGCAGCATATGAATGGTAACCATTCTGAGAATGATATGACATTGCATACGAAGAAAAAATTAAGAAGTAGAACTCTAAATCGAAAGGACTTTCTATCTAATGACCTGAGATGCACTCCACTGTCAAGTTCAATTTGTGATGCTGGTGAAACAGATGAAGTCACTGTTAAGGCTTTTGAAGTATCCAAGGAGGTTGATAAAGATGGTGTGAAATGTAGAATGGTTTCCACTGAAGCAGTGAAGGAGGATACACTAGAGTCAATATCTGGTCAGGATTTTGACAAGATTGAGAAGCAAAATACAGGGAGTAGCTTTATGCAAAAAGTTTTAGAGCATAAAACGGAAATTTTTCAGAATAATAATTCAACTGATCCTAAGATTAATAGCAAGTGTAATGCATTTGCAATTTCAAAAAGGATCAAGTGTGATACAATGAAATGTAAGGTGGATCAAGATACTCAAAAGTGTGAAACTAATCAGGAAGGAAAGGTAAAATCTGAAAGCAAGAATGAGTCAAAAGGTGAAAGGAGTCCTGGAAAAGTTATGACTGATGCTGAAAAAGATAGCATTGGTACTAGTAATAATGCAATGGTAAATGATAGAAAGAGTACTGGCATTGGTGTTACTTCTTCGAAAAGTAAAATGCATAAAATAAAGTCAATGAAGGATAATAAGGTCACAGATTGTGACAGAGATTCATTGAAAGGAAAAAAATCACAACGGAAAGTTGATCGAATAAATCCAACTGATAGGCCTACCCTTAATAAGGCTACAGTAAATTCTATCCTTGATCATGTTTATAAGAGTGCATATATAGTAAAGGAAAGACCAAGTGGCAATAAAGTTGTTAATCAGTTGTCAGCTGGGCCATGTGTAAAAGATGCACCAGGTGCATTTTCTATTGCTGAAAATAAACCAACTTCTGAGATTGTTCCGTCATCAGCAGCAGCAACACCTCAAGTTATTGAAGAAGATTGGGTATGCTGTGACAGTTGCCAGAAATGGCGACTTCTACCTATGGGTTTAAAGCCTGAGCAGCTTCCAGAGAAATGGTTGTGTAGCATGCTATATTGGCTGCCTGGAATGAATCGGTGTAACATCAGCGAGGAAGAGACAACGAAAACACTTTATGCTTCTTATCAAATGCCGATTTTTGTGGGTCAAAATAACATGCAAAACTGTGCCACTGGACCTGAAACTGAAGTGAGATCTGTTGATGCTCTGCAACTTGGCCTGAATCACAAAAAGTCCAGTTCTGATGTAATGCTTGATCGAGGAAAGAAGAAACATGGTATTAATGAAAAGGCAAGGTCAGTAATCAATAATGACATTGGGCCTGCAGACTCAAACCGTATGAAGAAATCTATTTCTAAACATTTGAGCAGGTTGAACAATTTGATAGAAGAAAAAAACACACCTAAGGTGAAAGAAAAGCAAATGAATGGAGGTGACAGAAATCATTTTAGATTGAAACATAAGATGGAGGATAATCAACATGGATCTGGAACTGCTAAGAAATCTAAGACTGAAGATGTTTACTATGCTGATAAACAACTGAATCCTAGCATGGAATTTAAGAAGGTTGGTCTAAACTCAAGAAATGGTTTACCAACAAAGGCTAGTGGGAAAAATATGGGGAAATATGATGATTATTGTTGGTCTGATGATCTGGAGGACAAGTTGGTAGTTCTGGTGAAGAAAGGAGACTGGGCACAGTTTTCATCAGATGATGGTTCATTGGATGCTACAAACAGCAGCAAAATTGGTTCAATTAAGAAAAGGAAAATGACTGACTGGCTGGATAGTGAGAAACATAACAAAACATTGTCCTTGGAAGGCGATATGAAATGTGGTAAAGAAGGCAATGTAAATAGGAGGGAGAATAAGTATATAGTTTTGAATATGGATGCAAAATCAGTAACCGAAAGGGATGATAAATTGGTTAGAGAAAGTGGGGTGAAGCGAGTTTTCTCTTCAGACAGCAGGGATGAAATGGCTATTGGAACAGAGGTGAAAAGTGTTAATAAGGTCCAGCAGCCAAGAAAGCACAAAAAAAATGTTGCTTCTTACCAAGCTTTGGATTGTTTTGATCAATTGGGTAAGGATTTAGGCTCTGGAGAACTTTCATTGACAGCAACTTCAAGCTCTTCTAAGGTTTCAGGGTCTCATAAAGCTAGAACTAACCTTGAAGATGTCAGAGGCTCACCTGTAGAATCTGTTACCTCATCACCTTTGTGGACCTCCAACATGGACAAGCGTATTTTGGCAGCAGGGGACACATCAGAAAAAGATGATGCAAGAAAACGTGGTCTTTCAAAAAGTTTGGATAATAGGGAGGGGAAGTTATCAGTAAAAATGAAGGAGAGAATTTCATATGACATACATCCTGCACATGGTAATTGTGGCAGTGGTTCACATCTTGAGGAGAAAATGAACAAGAGTAATAAGGAAAATGCACTTTCTTGGCAGAAATCTGGTAAGGTTACATCATTGCGGGTTAAGGAAAAGGACAGAATTTCTGGTTCGGAGGTTATTAGGGATAAGATGAAGGTTTCAGCTTCAGATAATGATTTTTACAAAAATGATGTGAGTTATGAGTCAAGAGTTGATCCTAATCATCATGCTTCTGGTACTGAGACAAGAAATGATGTTAAGAACAGTTCTCTGAAGTCTAATCACAAGATTGTCGACCCTAGTAAGAAAAATTCTTCAAGACATTGGTCAAATGAAGCTGGAAAACAAACTGTGCAAAAACAAAATGAGATTGGGAATCCAGTTCTGAAAGTGGATGCTACACGTAGCACTAATAGAAAGATTATCTCCCAGCAGAACCTGATTCAGAACTTTGTGGAAGAAAACATAGCTAATCAAGTATGCACTGGATCAAGAGATGGGAAAGCCAAAGTGATCGCATCTTCCGAGGATAAAGTGAAAAGGGAAACATTATATGTGGGTTCTAGAACTGCACCTGAGTCACAAAAGGGAGATATGTCTAATGGGCACCCAGTTCACGCTTCTGGCAATGATGTTCCCAAGTTTGCGAGAAATCCAATTGATGTTTGTTGCAAGGTTGGAGTTAATTGCAGTTCAGAAAGTTTCATACCTGATGGACAACTCAGTGAGTCAGGTCCTGTGACAACAAATTCTAGCCAAACTGCCTCTAGCATTCTGGAAGAAGCCACAAAGCTAAAAGATTCTGCAGATCATTATAAGAATTCTGGGTTTGAGTTTGAAAGTAATGAGACTTATTTTAAAGCTGCCTTGAAGTTTCTACATGGAGCATCACTTCTAGAAAGTTCTCACAGTGAGAGTAGCAAGCATGGAGAGACAAGTCAAATGCAAATATATGCTACTACTGCTAAACTTTTTGAATCCTGCGCCCATAAATATGAAAAATGCCAAGAAATGGCTGCAGCTGCTTTGGCATATAAATGCATGGAGGTGGTATACATGAGACTGGTTTACTGTAAACATTCTAGCATAAACAGGGATCGGCATGAGTTGCAATTAACTCTACAAATGGTTTCTCAAGGTGAATCTCCTTCGTCTTCTGCATCTGATATTGATAATTTAAATAACCTGGCGGTAGTGGATAAGGTTACTATGACAAGGGGTTCTAATACTCATGTTGCTAACAATCAAGTCATATCTGCTCAGAATCGCCCAAATATTGTCAGGCTTCTGGACTTTACTCAAGACATAAATCTTGCAATGGAGGCTTCTAGAAAATGCAAGAGCACTTACAGGGCTGCTAATTTGAACATGGAAGGGGCACGGAATAGGAATGATTGCATAACTTCTATTAGGAAGGTTGTTGATTTCAGCTTCCAAGATGTAGATGAGCTTGTACATCTGGTTTTGACTGCAATGAAAGCAATTACTCGTGCTGGCCTTGGTGGTGTTAGAGATTAA 4827 0.3882 MEANTEFEEGEAFFCYKDDDDDNIDLDSLSYIDERIQHALGHFRKEFEEGISADRLGAKFGDYGSFLPTCERSPPLRSCPKTPQKHSSSPKSPSNLHMVAAFQNSKAPPNIPPSMRLGTASYKAPPFRNIRVPSADNSVKNTDISSNEVIEKFTLKDCANKSENLTDQRTLKLRIKVKSDILAKKKAVIYSGLGLDDSPSSSMENSHEESEDMPHVSQETPEESPTSIVQVMISFTIPGGVLISPLHDSLLYLIRKEKAHGNIKPMYSLNGHQEHYSMSTDESDSFVGDGHLLKKRKVTVVDQSDKQHMNGNHSENDMTLHTKKKLRSRTLNRKDFLSNDLRCTPLSSSICDAGETDEVTVKAFEVSKEVDKDGVKCRMVSTEAVKEDTLESISGQDFDKIEKQNTGSSFMQKVLEHKTEIFQNNNSTDPKINSKCNAFAISKRIKCDTMKCKVDQDTQKCETNQEGKVKSESKNESKGERSPGKVMTDAEKDSIGTSNNAMVNDRKSTGIGVTSSKSKMHKIKSMKDNKVTDCDRDSLKGKKSQRKVDRINPTDRPTLNKATVNSILDHVYKSAYIVKERPSGNKVVNQLSAGPCVKDAPGAFSIAENKPTSEIVPSSAAATPQVIEEDWVCCDSCQKWRLLPMGLKPEQLPEKWLCSMLYWLPGMNRCNISEEETTKTLYASYQMPIFVGQNNMQNCATGPETEVRSVDALQLGLNHKKSSSDVMLDRGKKKHGINEKARSVINNDIGPADSNRMKKSISKHLSRLNNLIEEKNTPKVKEKQMNGGDRNHFRLKHKMEDNQHGSGTAKKSKTEDVYYADKQLNPSMEFKKVGLNSRNGLPTKASGKNMGKYDDYCWSDDLEDKLVVLVKKGDWAQFSSDDGSLDATNSSKIGSIKKRKMTDWLDSEKHNKTLSLEGDMKCGKEGNVNRRENKYIVLNMDAKSVTERDDKLVRESGVKRVFSSDSRDEMAIGTEVKSVNKVQQPRKHKKNVASYQALDCFDQLGKDLGSGELSLTATSSSSKVSGSHKARTNLEDVRGSPVESVTSSPLWTSNMDKRILAAGDTSEKDDARKRGLSKSLDNREGKLSVKMKERISYDIHPAHGNCGSGSHLEEKMNKSNKENALSWQKSGKVTSLRVKEKDRISGSEVIRDKMKVSASDNDFYKNDVSYESRVDPNHHASGTETRNDVKNSSLKSNHKIVDPSKKNSSRHWSNEAGKQTVQKQNEIGNPVLKVDATRSTNRKIISQQNLIQNFVEENIANQVCTGSRDGKAKVIASSEDKVKRETLYVGSRTAPESQKGDMSNGHPVHASGNDVPKFARNPIDVCCKVGVNCSSESFIPDGQLSESGPVTTNSSQTASSILEEATKLKDSADHYKNSGFEFESNETYFKAALKFLHGASLLESSHSESSKHGETSQMQIYATTAKLFESCAHKYEKCQEMAAAALAYKCMEVVYMRLVYCKHSSINRDRHELQLTLQMVSQGESPSSSASDIDNLNNLAVVDKVTMTRGSNTHVANNQVISAQNRPNIVRLLDFTQDINLAMEASRKCKSTYRAANLNMEGARNRNDCITSIRKVVDFSFQDVDELVHLVLTAMKAITRAGLGGVRD* 1609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g2110 1608 Pfam CW-type Zinc Finger 631 676 IPR011124 GO:0008270
Gso7g2110 1608 MobiDBLite consensus disorder prediction 492 519 - -
Gso7g2110 1608 MobiDBLite consensus disorder prediction 1017 1087 - -
Gso7g2110 1608 MobiDBLite consensus disorder prediction 1039 1054 - -
Gso7g2110 1608 PANTHER CW-TYPE ZINC FINGER 1 1602 - -
Gso7g2110 1608 MobiDBLite consensus disorder prediction 1061 1087 - -
Gso7g2110 1608 MobiDBLite consensus disorder prediction 521 554 - -
Gso7g2110 1608 Gene3D - 620 680 - -
Gso7g2110 1608 MobiDBLite consensus disorder prediction 202 218 - -
Gso7g2110 1608 MobiDBLite consensus disorder prediction 74 95 - -
Gso7g2110 1608 MobiDBLite consensus disorder prediction 1213 1227 - -
Gso7g2110 1608 ProSiteProfiles Zinc finger CW-type profile. 625 678 IPR011124 GO:0008270
Gso7g2110 1608 MobiDBLite consensus disorder prediction 1170 1212 - -
Gso7g2110 1608 MobiDBLite consensus disorder prediction 80 95 - -
Gso7g2110 1608 MobiDBLite consensus disorder prediction 1100 1128 - -
Gso7g2110 1608 MobiDBLite consensus disorder prediction 1170 1229 - -
Gso7g2110 1608 MobiDBLite consensus disorder prediction 458 557 - -
Gso7g2110 1608 MobiDBLite consensus disorder prediction 458 488 - -
Gso7g2110 1608 MobiDBLite consensus disorder prediction 196 222 - -
Gso7g2110 1608 PANTHER CW-TYPE ZINC-FINGER PROTEIN 1 1602 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g2110 Gso-Chr7 44950075 44961865 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g2110 - - gmx:100810441 3108.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g2110 7 44950075 44961865 Gso17g0194 17 1816732 1826464 GST
Gso7g2110 7 44950075 44961865 Gso15g1268 15 12912739 12922490 PCT
Gso15g1268 15 12912739 12922490 Gso7g2110 7 44950075 44961865 PCT