Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gso17g0194 | ATGCAAGCCAATATTGAGTTCGAGGAAGGAGAGGCTTTCTTCTGTTATAAGGATGATGATGACGACGACAACACTGACCTTGATTCTCTCTCTTACATTGATGAGAGGATTCAGCATGCTCTGGGTCATTTTCGAAAGGAATTTGAAGGAGGTGTTTCTGCTGGCCGTTTGGGTGCAAAATTTGGTGACTATGGCTCCTTTTTACCTACCTGTGAACACTCTCCTCCTTTGCGATCTTGTTCAAAGACTCCACAAAAGCACAATAGTTCACCAAAATCTCCTAGCAATCTCCACATGGCGGCTGCATTTCGTAACTCAAAAGCACTTCCAAATATGCCTTTTTCTATGAGGGTTGGAACTGCTTCCTATGAAGCTCCACCATTTCGTAATATAAGAGTACCTTCAGCAGATTACTCAGTAAAGAACACAGATATTTCCTCCAATGAAGTAATAGAGAAGTTCACTTTGAAAGACTGTGCAAATAAGTCAGAAATTTTGACTGACCAAAGAACACTGAAGTTGCGAATCAAAGTGAAATCAGATATCTTGGCAAAAAAGAATGCAGCAATTTATAGTGGTCTTGGACTCGATGACTCTCCATCTCCATCAATGGAGAACAGCCATGAGGAAAGTGAAGATATGCCACATGTATCTCAAGAAACCCCTGAAGAATCTCCAACCAGCATTGTTCAGGTTATGACTTCTTTCACTATCCCTGGAGGTGTGCTAATATCACCTCTACATGACAGTCTCCTGTACTTGATAAGAAAGGAAAAAGCTCTTGGAAACATCAAACCCATGTCTTCTCTTAATGGTAATTCCGTGTCTATTAATGAATCAGATTCTTTTGTGGGGGATGGACATTTGTTGAAGAAAAGGAAAGTGACAGTGGTGGACCAAAGTCACAAGCAGCATATGAATGGTAACTGTTCTGAGAATGATATGACATTGCATACGAAGAAAAAATTAGGAAATAGAACTCCGGATCGTAAGGACTTTCTATCTAATGACCTGAGATGCACTCCACTGTCAAGCTCAATTTGTGATGCTGGTGAAACAGCTGAAGTCACTGTTAAGGGTTTTGAAGTATCCAAGGAGGTTGATGGTGTGAAATGTAGAATGGTTTCCACTGAAGCAGTGAAGGAGGATTCACTAGAGTCAATATCTGGTCAGGATTTTGACAAGATTGAGAAGCAAAATACAGGGAGTGGCTTTATGAAAAATGTTTTAGAGCATAAAATGATAATTTCTCAGAATAATAATTCTACTAATCCTAAGACTAATAGCAAGTGTAACACATTTGCAATTTCAAAAAGGATCAAGTGTGATGCATTGAAATGTAAGGTGGATCAAGATACTCAAAAGTGTGAAACTAATCAGGAAGGAAAGGTGAAATCTGAAAGCAAGAATGAGTCAAAAGGTGAAAGGAGTCCTGGAAATGTTATGACTCTTGCTGAAAAAGATAGCATTGGTACTAGTAATAATGCAATGGTAAATGATAGAAAGAGAACAAGCATTGATGTTACTTCTTTGAAAAGTAAAATGCATAAAATAAAGTCACTGAAGGTTAATAAGGTCAGAGATTGTGACAGAGATTCATTGAAAGGAAAAAAATCACAACAGAAAGTTGATAGAATAAATCCAACTGATGGGCCTACTCTTAATAAGGCCACAGTAAATTCTAGCCTTGATCACGTTGATAAGAGTGCATATAGGGTTAAAGGAAATGAAAGACCAAGTGGCAATAAAGTTGTTAACCAGTTGTCAGCTGGGCCATGTGTAAAAGATGCACCAGGTGCATTTCCTATTGCTGAAAATAAACCAACTTCTGAAATGGTTCTGTCATCAGAAGCAGCAACACCTCAAGTTATCGAAGAAGATTGGGTATGCTGTGACAGTTGCCAGAAATGGCGGCTTCTACCTATGGGTTTAAAGCCTGAGCAGCTTCCAGAGAAATGGTTGTGTAGCATGCTATATTGGCTGCCTGGAATGAATCGGTGTAACATCAGCGAGGAGGAGACAACAAAAGCACTTTATGCTTTGTATCAAATGCCAATTTCTGAGGGTCAAAATAACATGCAAAGCCATGCCGCTGGACCTGAAACTGGAGTGGGATCTGTTGATGCTCTGCAACTTGGCCTGAATCGCAAAAAGTCCAGTTCTGATGTAATGCTTGATCGAGGAAAGAAGAAACATGGTATTAATGAAAAGACAAGGTCAGGAGTCAATAATGACATGCATCGGTTGTCAAATAATGCTCAAGAGTCTGTTAAAAATAGAAGCTTGAATGAGATGAATAAGCAGTCTACAGACTCAAACCGTATAAAGAAATCTATTTCTAAACATTCAAGCAGGTTGAACAATTTGATAGAAGAAAAAAACACACCTAAGGTGAAAGAAAAGCAAATGAATGGAGGTGACAGAAATCATGTTAGATTGAAACGTAAGATGGAGGATAATCAACATGGATCTGGAACTCCTAAGAAATCTAAGGCTGAAGATGTTTGCTATGCTGATAAACCACTGAATCCTGGCATGGAATTTAAAAAGGTGGGTCTAATCTCAAGAAATAGTTTACCAACAAAGGCTAGTGGGAGAAATATGAGGAAATATGATGATTATTGTTGGTCTGATGATCTAGTGGACAAGTTGGTAGTTCCAGTGAAGAAAGGAGACCGGGCACAGTTTTCATCAGATGATGGTTCATTGGATGCTACAAACACCAGAAAAAGTGGTTCAATTAAGAAAAGGAAAATGGCCGATTGGCTGGATAATGAGAAACATAACAAAACATTGTCCTTGGAAGGCAATATGCAATGTGGTAAAGAAGGGAATGCAAATAAGAAGGAGAAGAAGTATATAGTTTTGAATACGGAGGCAAAATCAGTAACTGAAAGGGATGATAAATTGATTAGAGAAAGTGGGATGAAGCGAGTTTTCTCTTCAGACAGCAGGGACGAAATGGCTATTGGGACAGAGGTGAAAAGTGTTAATAAGGTCCAGCAGCCAAGAAAGCACAACAAAATTGTTGCTTCTTACCAAGCTTTGGATTGTTTTGATCCATTGAGTAAGGATTTAGGCTCTGGACAGCTTTCATTGGCAGCAACTTCAAGCTCTTCTAAGGTTTCAGGGTCTCATAAAGCTAGAACTAACGTTGAAGATGTCAGAGGCTCACCTTTAGAATCTGTTACCTCATCACCTTTGTGGACCTCCAACATGGACAAGCATATTTTGGAATCAGGGGACACATCAGAAAAACATGATACTAGAAAAGGTGGTCTTTCAAAAAGTTTGAATAATAGGGAGGGGAAGTTATCAGTAAAAATGAAGGAGAGAATTTCATATGACATTCATCCTGCACATGGTAATTATGGAAGCAGTTCGCATCATGAGGAGAAAGTGAACAAGAGTAATAAGGAAGATGCACTTTCTTGGCAGAAATCTGGTAGGGTTACATCATTACGGGTTAAGGAAAAGGACAGAATTTCTGGTTCTGAGGTTAGTAGGGAGAAGATGAAGGTTTCAGCTTCAGATAATGATTTTCACAAAAATGGTGTGAGTTATGAGTCAGCAGTTGATCCAAATCGTCATGCTTCTGATACTGAGACAAGAAATGATGTTAAGAACAGTTCTCTGAAGTCTAATCACAAGATTGACAACCCTAGTAAGAAAAATTCTTCAAGGCATTGGTCAAATGAAGCTGGAAAACAAACTGTGCTAAAACAAAAAGATTTTGGGAATTCAGTTCTGAAAGTGGATGCTACATGTAGTACTAATAGAAAGATTATCTCCCAGCAGAACCTGATTCAGGACTTTGAGAAAGAAAACAAAGCTAATCAAGTATGCACTGGATCAAGAGATGGGAAAGCCAAAGTGATCACATCTTCCGAGGATAAAGTGAAAAGGGAAACATTATATGTGGGTTCTAGAACTGCACCTGAGTCGCAAAGGGGAGATATGTCTGATGGGCACCCATTCCATGCATCTGGCAATGATGTTCCCAAGTTTGTGAGAAATCCAGTTGATGTTAGTTGCAAGGTTGGATTTAATTGCAGTTCAGAAAGTTTCATACCTGATGGACAACTCAGTGAGTCAGGTCCTGTGACAACAAATTCTAGCAAAACTGCCACTAGCATTCTGGAAGAAGCCACAAAGCTAAAAGATTCTGCAGATCATTATAAGAATTCTGGGTTTGAGTTTGAAAGTAATGAGACTTATTTTAAATCTGCCTTGAAGTTTCTGCATGGAGCATCACTTCTAGAAAGTTCTCATGGTGAGAGTAGCAAGCATGGAGAGGCGAGTCAAATGCAAATATATGCCACTACAGCTAAACTTTTTGAATCCTGCGCCCATAAATATGAAAAACGCCAAGAAATGGCTGCAGCTGCTTTGGCATATAAATGCTTGGAGGTGGTATACATGAGACTGGTTTACTGTAAACATTCTAGCATAAACAGGGATCGGCATGAGTTGCAATCAACTCTACAAATGGTTTCTCAAGGTGAATCTCCTTCGTCTTCTGCATCTGATATTGATAATTTAAATAACCTGGCGGTAGCGGACAAGGCTACTTTGACAAGGGGTTCTAATACTCATGTTCCTAGCAATCAAGTCATATCTGCTCGGAATCGCCCAAATATTGTCAGGCTTCTTGATTTTACTCAAGACATAAATCTTGCAATGGAGGCTTCTAGAAAATGCAAGACCACTTACATGGCTGCTAGTTTGAACATGGAAGATTCATGGAATAGGGATTGCATAACTTCTATTAGGAAGGTTGTTGATTTCAGCTTCCAAGATGTAGATGAGCTTGTACATTTGGTTTTGACTGCAACAAAAGCAATTACTTGTGCTGGTCTTGGTGGTGTTAGAGATTAA | 4878 | 0.3916 | MQANIEFEEGEAFFCYKDDDDDDNTDLDSLSYIDERIQHALGHFRKEFEGGVSAGRLGAKFGDYGSFLPTCEHSPPLRSCSKTPQKHNSSPKSPSNLHMAAAFRNSKALPNMPFSMRVGTASYEAPPFRNIRVPSADYSVKNTDISSNEVIEKFTLKDCANKSEILTDQRTLKLRIKVKSDILAKKNAAIYSGLGLDDSPSPSMENSHEESEDMPHVSQETPEESPTSIVQVMTSFTIPGGVLISPLHDSLLYLIRKEKALGNIKPMSSLNGNSVSINESDSFVGDGHLLKKRKVTVVDQSHKQHMNGNCSENDMTLHTKKKLGNRTPDRKDFLSNDLRCTPLSSSICDAGETAEVTVKGFEVSKEVDGVKCRMVSTEAVKEDSLESISGQDFDKIEKQNTGSGFMKNVLEHKMIISQNNNSTNPKTNSKCNTFAISKRIKCDALKCKVDQDTQKCETNQEGKVKSESKNESKGERSPGNVMTLAEKDSIGTSNNAMVNDRKRTSIDVTSLKSKMHKIKSLKVNKVRDCDRDSLKGKKSQQKVDRINPTDGPTLNKATVNSSLDHVDKSAYRVKGNERPSGNKVVNQLSAGPCVKDAPGAFPIAENKPTSEMVLSSEAATPQVIEEDWVCCDSCQKWRLLPMGLKPEQLPEKWLCSMLYWLPGMNRCNISEEETTKALYALYQMPISEGQNNMQSHAAGPETGVGSVDALQLGLNRKKSSSDVMLDRGKKKHGINEKTRSGVNNDMHRLSNNAQESVKNRSLNEMNKQSTDSNRIKKSISKHSSRLNNLIEEKNTPKVKEKQMNGGDRNHVRLKRKMEDNQHGSGTPKKSKAEDVCYADKPLNPGMEFKKVGLISRNSLPTKASGRNMRKYDDYCWSDDLVDKLVVPVKKGDRAQFSSDDGSLDATNTRKSGSIKKRKMADWLDNEKHNKTLSLEGNMQCGKEGNANKKEKKYIVLNTEAKSVTERDDKLIRESGMKRVFSSDSRDEMAIGTEVKSVNKVQQPRKHNKIVASYQALDCFDPLSKDLGSGQLSLAATSSSSKVSGSHKARTNVEDVRGSPLESVTSSPLWTSNMDKHILESGDTSEKHDTRKGGLSKSLNNREGKLSVKMKERISYDIHPAHGNYGSSSHHEEKVNKSNKEDALSWQKSGRVTSLRVKEKDRISGSEVSREKMKVSASDNDFHKNGVSYESAVDPNRHASDTETRNDVKNSSLKSNHKIDNPSKKNSSRHWSNEAGKQTVLKQKDFGNSVLKVDATCSTNRKIISQQNLIQDFEKENKANQVCTGSRDGKAKVITSSEDKVKRETLYVGSRTAPESQRGDMSDGHPFHASGNDVPKFVRNPVDVSCKVGFNCSSESFIPDGQLSESGPVTTNSSKTATSILEEATKLKDSADHYKNSGFEFESNETYFKSALKFLHGASLLESSHGESSKHGEASQMQIYATTAKLFESCAHKYEKRQEMAAAALAYKCLEVVYMRLVYCKHSSINRDRHELQSTLQMVSQGESPSSSASDIDNLNNLAVADKATLTRGSNTHVPSNQVISARNRPNIVRLLDFTQDINLAMEASRKCKTTYMAASLNMEDSWNRDCITSIRKVVDFSFQDVDELVHLVLTATKAITCAGLGGVRD* | 1626 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gso17g0194 | 1625 | MobiDBLite | consensus disorder prediction | 545 | 565 | - | - | |
| Gso17g0194 | 1625 | MobiDBLite | consensus disorder prediction | 76 | 97 | - | - | |
| Gso17g0194 | 1625 | PANTHER | CW-TYPE ZINC-FINGER PROTEIN | 1 | 1619 | - | - | |
| Gso17g0194 | 1625 | MobiDBLite | consensus disorder prediction | 1078 | 1106 | - | - | |
| Gso17g0194 | 1625 | MobiDBLite | consensus disorder prediction | 1057 | 1077 | - | - | |
| Gso17g0194 | 1625 | MobiDBLite | consensus disorder prediction | 456 | 481 | - | - | |
| Gso17g0194 | 1625 | PANTHER | CW-TYPE ZINC FINGER | 1 | 1619 | - | - | |
| Gso17g0194 | 1625 | MobiDBLite | consensus disorder prediction | 1035 | 1106 | - | - | |
| Gso17g0194 | 1625 | MobiDBLite | consensus disorder prediction | 456 | 474 | - | - | |
| Gso17g0194 | 1625 | MobiDBLite | consensus disorder prediction | 1195 | 1230 | - | - | |
| Gso17g0194 | 1625 | MobiDBLite | consensus disorder prediction | 531 | 566 | - | - | |
| Gso17g0194 | 1625 | MobiDBLite | consensus disorder prediction | 203 | 219 | - | - | |
| Gso17g0194 | 1625 | MobiDBLite | consensus disorder prediction | 1152 | 1178 | - | - | |
| Gso17g0194 | 1625 | ProSiteProfiles | Zinc finger CW-type profile. | 622 | 675 | IPR011124 | GO:0008270 | |
| Gso17g0194 | 1625 | MobiDBLite | consensus disorder prediction | 194 | 224 | - | - | |
| Gso17g0194 | 1625 | Pfam | CW-type Zinc Finger | 628 | 673 | IPR011124 | GO:0008270 | |
| Gso17g0194 | 1625 | MobiDBLite | consensus disorder prediction | 720 | 743 | - | - | |
| Gso17g0194 | 1625 | MobiDBLite | consensus disorder prediction | 718 | 746 | - | - | |
| Gso17g0194 | 1625 | MobiDBLite | consensus disorder prediction | 1125 | 1140 | - | - | |
| Gso17g0194 | 1625 | Gene3D | - | 615 | 677 | - | - | |
| Gso17g0194 | 1625 | MobiDBLite | consensus disorder prediction | 1118 | 1239 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Gso17g0194 | Gso-Chr17 | 1816732 | 1826464 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gso17g0194 | - | - | gmx:100793863 | 3170.18 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Gso17g0194 | 17 | 1816732 | 1826464 | Gso17g0194 | 17 | 1816732 | 1826464 | ECH | |
| Gso7g2110 | 7 | 44950075 | 44961865 | Gso17g0194 | 17 | 1816732 | 1826464 | GST | |
| Gso17g0194 | 17 | 1816732 | 1826464 | Gso15g1268 | 15 | 12912739 | 12922490 | PCT | |
| Gso15g1268 | 15 | 12912739 | 12922490 | Gso17g0194 | 17 | 1816732 | 1826464 | PCT |