Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1268 ATGGTGGAGATGAAGGAAAATACTGAGCTTGAGGAAGGAGAGGCTTGCTATTATAATGGTGACGATGAAGCCAACATTGACCCTGATTCTTTCTCTTACATTGATGAGAAGATTCAACATTTTCTTGGTCATTTTCAAAAGGACTTTGAAGGTGGTGTATCTGCTGAGAATTTGGGTGCAAAATTTGGTGGCTATGGTTCCTTTTTACCTACCCAAGAGCGCTCTCCTTGTTTATGGTCTCATCCAAGGACTCCACAAAGAAACCACAGCTCATCAAAGTCTAATATCAATCTCCACATGGAGGTTGTGTCTCATAACACAAAAGCATCTTCAAATGTGCCTCATGCAAGGCCTGAAAATGCTTCTCATAGTTCTTATTCACTTCGTGATTTAAGAGAAGCTTCAGTAAATGACTCAGTGAAGAAAGAACGAGGAATTTCTTCCAGTGATACAGCTGAGAGGTGCACTTTGAAAGATGATACTACAAAAAAGACAGGAAATTCAACTGACCAAAGGCCACTGAAGTTTCGAATTAAAATGAAATCTAATATCTTAGCACAAAAGAATGCTGAGATATATAGTGGCCTTGGGCTTGATAACTCTCCCTCTTCCTCAATGGGGAACAGCCCTGTGGAAAGTGAAGGCATGCCACCAGTGTCTCAAGAGAATGCTGAAGGTTCTCCAACTGGCATTATTCAGGTTATGACTTCCTTTCCTATCCTTGGGTGTGTCTTAGTATCACCTCTACACGAAAGTTTGCTCTACATGATGAAGAATGAAAAAGTTATTAGCGACAGCAAATACTTGTCTTCTCTTAAAGGTCATCAAGATACTTGTTCCATGTCTACTGATGAATCAGATTCTTTTGTGGGAAATGAACATTTGAAGAAGAGGACAGTGAGAATAGTGAGACAAAGTGAAAAACAGTTGGAATTGAAGCATACAAATGGCACCTTTTCTGAGAAGGATTTGACATTGCATACAAAGAAAAGATTAGGAAACAGAACGCCAGATTGTAAAGATTTTCTCTCTAATGACTTGAAATGTACACCTCTGTCAAGTTCAATATGTGATGCTGGTGAAACAGCTGAAGTCACTGCCAAAGCTTTTGAAGCCTCCAAGGAGTTTAATGAGAATGGGGTGCAAGGCAGAATGGTTCCTGTAGAAGCTTTGAAGGAGGAGTCGTTGGAGTCAATATCTGGTCAGGATTTTGAGAAGACTGAAAAGCAAAATTCAGGAAATGGTTTTATGAAAAATGCTTTAGAGCATAAACTGGAAAATTCTCTGAAACATAAGGTAGATCATAAGTATGAGAACCATCAGAAAGTAAAGGCTGTGTCTGAGCGGAAGACTAAGTCAAAGGGTGATCAGAGTCCTAGAAAAGCTGAGGCTGTTGCTAGAAAAGATAGCTTTTGTGGTACTAGTGATGCAATGGTAATCAATAAAGTGAGTGCTGGCTGTGACAATACATCTAAAAGTAAAATGAATAAGTCAAAGTCACTGAAGGGCAAAAAGTTCAGTGATAGTAACAGGGATTCATTGAGAGGAAAAAAATCGGAACAGAAAGTTGACAGTGTTGCCGGTAATGGTGCTATAAAAAATGGTAACATCAGTAATGGAAAACAGAGTGCATTTGGGGCTAAGGTAAAGGTAAGACCGAGTTGCCATAAAGTGGCCAACCAGTTGCTAGCTGGGCCATGCATAAAAGATACTTCAGCTGCACTTCTTATTACTGAAAACAGCATTGCTCCAGAGATGATTTCATCAGCAGGAGTGCCTCAAGTTATTGCGGAAGATTGGGTATGTTGTGACAGTTGCCAGAAATGGCGGCTACTGCCTAATGGTGTGAAGCCAGAGCATCTTCCAGAGAAGTGGTTGTGTAGCATGCTAAATTGGCTGCCTGGAATGAATTCATGTGACTTCAGTGAGGATGAGACAACAAAAGCACTTTACGCCTCGTATCAAATGCCAATTTCCAATGGTCAAAATAACATGCAAAGCCATGGCACTGAAACTGCAATTGGAGTGAGCTCTACTGATGCTTTGCAGTATGGCCTGAATCACAACATGTCCAGTTCTGATATGTTGTCTGAACGAGGAAAGAAGAAACATGTTATTAAGGAAAAGACAATGTCAGGAATTAATAATGACGTGCTTCAGTTTCCAAATTCTGCCAAGACCAATGTTCAAGTATCTGGAAAAAATAGAAGCTTGAATGTCATGAATCAGCATCCTGCCGACTTAAACCCAATGAAGAAGATGAGTTCTTCTAAACATCTTAGCAGTCTTGACAATATGATAGAAGAGAAAAGCGTGCCTATAGAGAAAGAAAAGCAAGTAAATGAAGGTGAGAGAAAGCATGTTAAGTTGAAACGTAAGATGGATGCTGATCAATATAAATTGGGAACTCCTAAGAAACCAAAAATTGAAAATGTTTTCTATGCTGATAAGCAATTGAATCCTGGCATGGACCTTGAGAAGGTGTCTCTATATTCAAGAAATAGTTTGGCAACAAAAGCTAGTGGGAAGGATATGAGGAAGCATGATGAATATTGTTTATCTGATGACGTACAGGACAGTTTACCAGTCACTGTCAAGAAAGAGGGAGATCAAGCTCAGGTCTTGTCTGGTGGTGGGTCCTTGGATGTGATAAACGGCAGTAAAAGTGGTTTAATGAAGAAAAGGAAATTGAAGGAGTGTATGGATGATGAAAAGCATAACAACTCTTGCTCCTCACATGGTGAAAAGCATAACAACTCATACTCCTCGCATGGTGAAAAGCAGTATGGTGAAGAGGGCAATGCAAGTGAATTTAGGAAGGAAAAGAGATACAGAATTTTGAATAAAGAGGCAAAATCATTAACTGAAGGTGATAATAAATTGAGTAAAGGTGGGATGAGACAAGTTTGCTTGTCAGGCAATAGGGACCAAATGGCTGTTGGGACAGAAGTAAGATTTGTTGATAAAGGCAACCAACCAAGGAAGCATAGGAAAAATACTGCATCTCTTCATGCTTCAGATGGTATTGGTCAATTGGGCAAGGATTTGGGCTCTAGACCGCTTTCATTGGCAGCAACTTCGAGCTCTTCTAAAGTTTCAGGGTCTCATAAAGCTAAAACCTACTTTGAAGATCTGAGAGGTTCACCTGTTGAATCTGTCACCTCATCACCTCTGAGGGCCTTCAACTCGGATAAGAATATTTGGGCAGTAGGAGGCACTTCAGCGAAAGATGATGCTACAAAAGGTTGCCTCTCTTCAGTAGGTTCCAGGAGAAGCGTTGATAATAGGGAGGGAAAGCTATCAGTAAAATTGAAGGCGGGTAGAATTTCACGTGACTTACATCCTGCATCCCACAAATTATCTTCAATAGAGGTCCGGGTTGAGGATGCTAAAGACACAGCCAGGGTCCAAGCTAAAAAATCTTCTGAACTAAAGAATAGTCATTTGCTTGAAGGTGGTGTTCATGTTGAACAACCTGGTTATTGTGCTAATGGTAAACGTTATGAGGAGAAAGTAAACAAGGACAATCAGGAAAGTGAATTTTCTTGGCAGAAATCTGGTAAGGTTTCATCATTGCACAGCAAGGAGAAGGACAGAAAGTCTGGTTCTCATGTTGGTACAGATAAGATGAAGATTTCAGTTTCAGAGACTGGTGGTTATTCAAAAAAAAGTGGGAAGTATGATTCAGCAGTTGATCCCAGTAATCATGAATCTGGTGCTGAGTCAAAAAATAATGCTAAATATATTTCTCCAAAGTCTAAAAGTGAAATTGACTGTATTAGTCAGAAAAGTGCTTTAAGACATGGGCCAAATGAAACTGGAAAGCAAACTGAGATAAAACAAAGAGACTTTGAGAATTCAATTCTGAAGATGGATGCTCAATGTAGCACTGATAATAATAAGCCTATCCCCTGGCAAAACCTGACTCAGGATTTTGAGGGAGAAAACAAAGCTAATCTCACAGAATCAAGAGTTGGGAAATCCAAAGTTCTCTCGTCTGCAGTGGATGAAGTAAAAAGGGAAGCATTGAGTGTGGGTTCTAGAACTGTACCTCAGCATCAAAAGGGAGGCATGTCTAATGAGCATCATGTCCATGTTTCTGGCAATGATGATATGGCCAAGTCAATGAGAAATTATGCTGATGTTAGTAACAATGCTGGAGTTAATTATAGTTCTGGAAATTTTGCACCTGATCAGCAACTTACGTTGTTAAGTCCTTTGAGAACAAATTCTAACCAAACTGCTACTGACACCCTGAAAGAAGCTGCAAAACTAAAAGATAGAGCAGATAATTATAAGAACTCCGGGTTTGACTTTGAAAGCAATGAGACATACTTTCAAGCTGGTTTGAAGTTTCTGCATGGAGCATCTCTTTTAGAAAATTGTCATAATGAGAGTAGCAAGCATGGGGAAATGAGTCAAATGCAAATTTTTGCTACTGCAGCCAAACTTTTCAAATGCTGTGCCCATGAATATGAAACTCACCAAGAAATGGCAGCTGCTGCTTTGTCATATAAATGCATGGAGGTGGCATACATGAGAGTGGTTTACTGTAAAAATTCTAGTACTAACAGAGATCGACAGGAGTTGCAATCAACTCTTCAACTGGTTTCTCAAGGTGAATCTCCTTCATCTTCTGCATCCGATGTTGATAACCTTAACAATCAGGCAGCAGCAGATAAGGCTGCTTTGCCCAGGGGTACTAATACTCATGTTGCTATCAATCAAGTCATATCTGCTCGAACTCGTCCAAATTTAGTCAGGCTTCTTGATTTTACTCAGGACATACATTTTGTAATGGAAGCTTCTAGAAAATGTCAGAGCACTTTTGCTGCTGCTAATGTGATCATGCAAGAAGCACGGAATAAGGACTGTATAGCTTCTATTAGAAGCGTTATTGATTTCAGCTTCCAGGATGTAGATGAGCTTGTACGTCTGATTTGGACCGCAACAAAAGCCATAAGTCGCGCTGGTCTTGGTGGTACTAGAGATTAA 4995 0.3994 MVEMKENTELEEGEACYYNGDDEANIDPDSFSYIDEKIQHFLGHFQKDFEGGVSAENLGAKFGGYGSFLPTQERSPCLWSHPRTPQRNHSSSKSNINLHMEVVSHNTKASSNVPHARPENASHSSYSLRDLREASVNDSVKKERGISSSDTAERCTLKDDTTKKTGNSTDQRPLKFRIKMKSNILAQKNAEIYSGLGLDNSPSSSMGNSPVESEGMPPVSQENAEGSPTGIIQVMTSFPILGCVLVSPLHESLLYMMKNEKVISDSKYLSSLKGHQDTCSMSTDESDSFVGNEHLKKRTVRIVRQSEKQLELKHTNGTFSEKDLTLHTKKRLGNRTPDCKDFLSNDLKCTPLSSSICDAGETAEVTAKAFEASKEFNENGVQGRMVPVEALKEESLESISGQDFEKTEKQNSGNGFMKNALEHKLENSLKHKVDHKYENHQKVKAVSERKTKSKGDQSPRKAEAVARKDSFCGTSDAMVINKVSAGCDNTSKSKMNKSKSLKGKKFSDSNRDSLRGKKSEQKVDSVAGNGAIKNGNISNGKQSAFGAKVKVRPSCHKVANQLLAGPCIKDTSAALLITENSIAPEMISSAGVPQVIAEDWVCCDSCQKWRLLPNGVKPEHLPEKWLCSMLNWLPGMNSCDFSEDETTKALYASYQMPISNGQNNMQSHGTETAIGVSSTDALQYGLNHNMSSSDMLSERGKKKHVIKEKTMSGINNDVLQFPNSAKTNVQVSGKNRSLNVMNQHPADLNPMKKMSSSKHLSSLDNMIEEKSVPIEKEKQVNEGERKHVKLKRKMDADQYKLGTPKKPKIENVFYADKQLNPGMDLEKVSLYSRNSLATKASGKDMRKHDEYCLSDDVQDSLPVTVKKEGDQAQVLSGGGSLDVINGSKSGLMKKRKLKECMDDEKHNNSCSSHGEKHNNSYSSHGEKQYGEEGNASEFRKEKRYRILNKEAKSLTEGDNKLSKGGMRQVCLSGNRDQMAVGTEVRFVDKGNQPRKHRKNTASLHASDGIGQLGKDLGSRPLSLAATSSSSKVSGSHKAKTYFEDLRGSPVESVTSSPLRAFNSDKNIWAVGGTSAKDDATKGCLSSVGSRRSVDNREGKLSVKLKAGRISRDLHPASHKLSSIEVRVEDAKDTARVQAKKSSELKNSHLLEGGVHVEQPGYCANGKRYEEKVNKDNQESEFSWQKSGKVSSLHSKEKDRKSGSHVGTDKMKISVSETGGYSKKSGKYDSAVDPSNHESGAESKNNAKYISPKSKSEIDCISQKSALRHGPNETGKQTEIKQRDFENSILKMDAQCSTDNNKPIPWQNLTQDFEGENKANLTESRVGKSKVLSSAVDEVKREALSVGSRTVPQHQKGGMSNEHHVHVSGNDDMAKSMRNYADVSNNAGVNYSSGNFAPDQQLTLLSPLRTNSNQTATDTLKEAAKLKDRADNYKNSGFDFESNETYFQAGLKFLHGASLLENCHNESSKHGEMSQMQIFATAAKLFKCCAHEYETHQEMAAAALSYKCMEVAYMRVVYCKNSSTNRDRQELQSTLQLVSQGESPSSSASDVDNLNNQAAADKAALPRGTNTHVAINQVISARTRPNLVRLLDFTQDIHFVMEASRKCQSTFAAANVIMQEARNKDCIASIRSVIDFSFQDVDELVRLIWTATKAISRAGLGGTRD* 1665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1268 1664 MobiDBLite consensus disorder prediction 1190 1206 - -
Gso15g1268 1664 MobiDBLite consensus disorder prediction 1176 1255 - -
Gso15g1268 1664 MobiDBLite consensus disorder prediction 134 166 - -
Gso15g1268 1664 Gene3D - 595 649 - -
Gso15g1268 1664 MobiDBLite consensus disorder prediction 197 225 - -
Gso15g1268 1664 MobiDBLite consensus disorder prediction 904 935 - -
Gso15g1268 1664 MobiDBLite consensus disorder prediction 106 170 - -
Gso15g1268 1664 ProSiteProfiles Zinc finger CW-type profile. 594 647 IPR011124 GO:0008270
Gso15g1268 1664 PANTHER CW-TYPE ZINC-FINGER PROTEIN 4 1659 - -
Gso15g1268 1664 Pfam CW-type Zinc Finger 600 645 IPR011124 GO:0008270
Gso15g1268 1664 MobiDBLite consensus disorder prediction 989 1014 - -
Gso15g1268 1664 MobiDBLite consensus disorder prediction 432 467 - -
Gso15g1268 1664 MobiDBLite consensus disorder prediction 501 522 - -
Gso15g1268 1664 MobiDBLite consensus disorder prediction 1235 1255 - -
Gso15g1268 1664 MobiDBLite consensus disorder prediction 487 537 - -
Gso15g1268 1664 MobiDBLite consensus disorder prediction 106 132 - -
Gso15g1268 1664 Coils Coil 1415 1435 - -
Gso15g1268 1664 MobiDBLite consensus disorder prediction 1342 1363 - -
Gso15g1268 1664 MobiDBLite consensus disorder prediction 913 929 - -
Gso15g1268 1664 PANTHER CW-TYPE ZINC FINGER 4 1659 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1268 Gso-Chr15 12912739 12922490 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1268 - - gmx:102667636 3262.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g2110 7 44950075 44961865 Gso15g1268 15 12912739 12922490 PCT
Gso17g0194 17 1816732 1826464 Gso15g1268 15 12912739 12922490 PCT
Gso15g1268 15 12912739 12922490 Gso7g2110 7 44950075 44961865 PCT
Gso15g1268 15 12912739 12922490 Gso17g0194 17 1816732 1826464 PCT