Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g2020 ATGGGTATCCATTTGAACAGGGTCATCAATAATGTTGGGATTGTGCTTCGATTTTTCGTAGTCTTGGTCCTGTTTTTTAGCATTTCAACTTCAGACGATCTCCCTGCAACTTTTGTATTCGGAGATTCCCTTGTTGACGTGGGAAACAATAATTACCTTGTTTCCCTCTCAAAGGCTAATTATCTACCCAATGGCATTGATTTTGGAAGACCAACGGGAAGGTTCACTAATGGAAGAACCATCGTGGACATAGTTGGTCAGGAATTGGGTACCGGTTTCACCCCACCTTACTTGGCACCCTCCACAATTGGACCAGTAGTTCTGAAGGGTGTAAACTATGCTTCTGGTGGAGGTGGAATTCTCAATTTCACTGGAAAAGTCTTTGGTGGTCGACTGAACTTCGACGCACAGATAGATAATTTTGCAAATACCAGGCAAGACATCATATCCCACATTGGAGCTCCTGCGGCTCTTAATCTACTCAAGAGGGCATTGCTCACCGTGACAATAGGCTCAAATGATTTCATAAATAACTACTTAGCACCAGCACTCACATTTTCCGAGCGGAAATCAGCGTCTCCAGAAATCTTTGTGACCACCATGATATCAAAACTCAGAGTTCAGCTCACTAGGTTATTCAATCTGGGAGCTAGAAAATTTGTTGTGGCAAATGTGGGGCCTATTGGGTGTATACCAAGCCAGAGGGATGCAAACCCAGGTGCAGGAGATAGCTGTGTTGCTTTCCCCAATCAGCTAGCACAGTTATTTAATTCCCAGTTAAAGGGCATTATTACAGATCTCAACTCAAATTTGGAGGGTGCAGTGTTTGTTTATGCAGATGTCTACCAAATTTTAGAAGACATTCTCCAGAATTATTTAGCACTTGGTTTTGATAATGCAGTTTCTGCTTGCTGTCACGTGGCTGGGCGCTTTGGAGGTCTGATCCCCTGTGGTCCTACATCGAGACTTTGCTGGGACCGATCTAAGTATGTTTTTTGGGACCCTTACCATCCTTCTGATGCTGCAAACGTTATCATCGCTAAGCGTCTCTTAGATGGTGGTTCCAATTATATTTGGCCAAAGAACATTCGCCAACTCTTTCAATCTTAA 1110 0.4342 MGIHLNRVINNVGIVLRFFVVLVLFFSISTSDDLPATFVFGDSLVDVGNNNYLVSLSKANYLPNGIDFGRPTGRFTNGRTIVDIVGQELGTGFTPPYLAPSTIGPVVLKGVNYASGGGGILNFTGKVFGGRLNFDAQIDNFANTRQDIISHIGAPAALNLLKRALLTVTIGSNDFINNYLAPALTFSERKSASPEIFVTTMISKLRVQLTRLFNLGARKFVVANVGPIGCIPSQRDANPGAGDSCVAFPNQLAQLFNSQLKGIITDLNSNLEGAVFVYADVYQILEDILQNYLALGFDNAVSACCHVAGRFGGLIPCGPTSRLCWDRSKYVFWDPYHPSDAANVIIAKRLLDGGSNYIWPKNIRQLFQS* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g2020 369 Pfam GDSL-like Lipase/Acylhydrolase 38 349 IPR001087 GO:0016788
Gso7g2020 369 Gene3D SGNH hydrolase 26 354 IPR036514 -
Gso7g2020 369 SUPERFAMILY SGNH hydrolase 39 352 - -
Gso7g2020 369 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE SUPERFAMILY PROTEIN 22 368 - -
Gso7g2020 369 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE-RELATED 22 368 - -
Gso7g2020 369 CDD SGNH_plant_lipase_like 35 353 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g2020 Gso-Chr7 44236466 44238529 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g2020 34 369 Acyl Lipid Metabolism Gene Families AT4G10950 35.988 8.71e-69 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g2020 - - gmx:100791871 736.873
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g2020 7 44236466 44238529 Gso17g0277 17 2494025 2496259 GST
Gso7g2020 7 44236466 44238529 Gso15g1169 15 11458606 11460940 PCT
Gso7g2020 7 44236466 44238529 Gso9g0299 9 2874390 2876682 PCT
Gso15g1169 15 11458606 11460940 Gso7g2020 7 44236466 44238529 PCT
Gso9g0299 9 2874390 2876682 Gso7g2020 7 44236466 44238529 PCT