Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0277 ATGGGTATCCATTTGAACAGGGTCATCAATAATGTTGGGATTCTGCTTCGAGTTTTTGTAGTCTTGGTGGTCCTGTTTGGCATTTCAACTTCATACGATCTCCCTTCTACTTTTATATTCGGAGATTCACTTGTTGACGCGGGAAACAATAATTACCTTGTTTCCCTCTCAAAGGCTAATTATCTACCCAATGGCATTGATTTTGGAAGACCAACGGGAAGGTTCACTAATGGAAGAACCATCGTGGACATCGTTGGTCAGGAATTGGGTACCGGTTTCACCCCACCTTATTTGGCACCCTCCACAATTGGACCGGTAATTCTGAAGGGTGTAAATTATGCCTCTGGTGGAGGTGGAATTCTCAATTTCACTGGAAAAGTCTTCGGTGGTCGACTGAACTTTGACGCACAGATAGATAGTTTTGCAAATACCAGGCAAGACATCATATCCAGCATTGGTGTTCCTGCGGCTCTTAATCTACTCAAAAGGGCATTGTTCACCGTCACAATAGGCTCAAACGATTTCATAAATAACTACCTAGCACCAGCACTCACATTTTCCGAGCGGAAATCGGCGTCTCCAGAAATCTTTGTGACCACCATGATGTCAAAACTCAGAGTTCAGCTCACTAGGTTATTCAACCTGGGAGCTAGAAAAATTGTTGTGGCAAATGTGGGGCCCATTGGGTGTATACCAAGTCAGAGGGATGCAAACCCAGGTGCAGGAGATAGCTGTGTTGCTTTCCCCAATCAGCTGGCACAGTTATTTAATTCCCAGCTAAAGGGCCTCATTACAGATCTCAACTCAAATCTGGAGGGTGCAGTATTTGTTTATGCAGATGTCTACCAAATTTTACAAGATATTCTCCAGAGTTATGTAGCACTTGGTTTTGATAATGCATTTTCTGCTTGCTGTCACGTTGCTGGGCGCTTTGGAGGTCTGATCCCCTGTGGTCCTACATCGAGACTTTGCTGGGACCGATCCAAGTATGTGTTTTGGGACCCTTACCACCCTTCTGATGCTGCAAATGTTATCATCGCTAAACGTCTCTTAGATGGTGGTTCCAATTATATTTGGCCAAAGAACATTCGCCAACTCTTTCAATCTTAA 1110 0.4405 MGIHLNRVINNVGILLRVFVVLVVLFGISTSYDLPSTFIFGDSLVDAGNNNYLVSLSKANYLPNGIDFGRPTGRFTNGRTIVDIVGQELGTGFTPPYLAPSTIGPVILKGVNYASGGGGILNFTGKVFGGRLNFDAQIDSFANTRQDIISSIGVPAALNLLKRALFTVTIGSNDFINNYLAPALTFSERKSASPEIFVTTMMSKLRVQLTRLFNLGARKIVVANVGPIGCIPSQRDANPGAGDSCVAFPNQLAQLFNSQLKGLITDLNSNLEGAVFVYADVYQILQDILQSYVALGFDNAFSACCHVAGRFGGLIPCGPTSRLCWDRSKYVFWDPYHPSDAANVIIAKRLLDGGSNYIWPKNIRQLFQS* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0277 369 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE-RELATED 22 368 - -
Gso17g0277 369 Gene3D SGNH hydrolase 28 354 IPR036514 -
Gso17g0277 369 CDD SGNH_plant_lipase_like 35 353 IPR035669 -
Gso17g0277 369 Pfam GDSL-like Lipase/Acylhydrolase 38 349 IPR001087 GO:0016788
Gso17g0277 369 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE SUPERFAMILY PROTEIN 22 368 - -
Gso17g0277 369 SUPERFAMILY SGNH hydrolase 39 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0277 Gso-Chr17 2494025 2496259 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0277 34 369 Acyl Lipid Metabolism Gene Families AT4G10950 35.693 2.71e-69 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0277 - - gmx:100809250 738.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0277 17 2494025 2496259 Gso17g0277 17 2494025 2496259 ECH
Gso7g2020 7 44236466 44238529 Gso17g0277 17 2494025 2496259 GST
Gso17g0277 17 2494025 2496259 Gso15g1169 15 11458606 11460940 PCT
Gso17g0277 17 2494025 2496259 Gso9g0299 9 2874390 2876682 PCT
Gso15g1169 15 11458606 11460940 Gso17g0277 17 2494025 2496259 PCT
Gso9g0299 9 2874390 2876682 Gso17g0277 17 2494025 2496259 PCT