Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1169 ATGGGTATCAAGTTGAATAGACCAGTCACTGTTGAGATTTTGTTTCAAGTTTTTATAGTCCTATCCTTGTTTAGGATTACAACTTCGGTTTTACAACCAGCAAATTTTGTCTTCGGAGATTCTCTTGTCGATGTGGGGAACAACAATTACATTGCTTCCCTCTCAAAGGCTAATTATGTTCCTTTTGGAATTGACTTTGGAAGACCAACAGGGAGGTTCACAAATGGAAGAACCATTGTTGACATTATAGGTCAAGAAATGGGTATTGGTTTTACCCCACCTTACTTAGCACCCACTACAGTTGGACCAGTGATTTTGAAAGGTGTCAACTATGCTTCTGGGGCAGGTGGAATCCTCAATCTCACTGGAAAGCTCTTTGGTGACCGAATCAACTTTGATGCACAGTTAGATAATTTTGCTAATACAAGGCAAGACATCATCTCCAACATTGGTGTTCCTACGGCTCTCAATCTATTCAAAAGGTCTATATTTTCAGTAGCAATGGGTTCCAACGATTTCATTAATAACTATTTAGCACCAGCAGTCTTAATTTACGAGAAGAATTTGGCATCTCCAGAACTCTTTGTGACCACCTTAGTGTCAAGGTTCAGAGAACAGCTCATTAGGCTATTCAATCTAGGTGCCAGGAAAATTATTGTGACAAATGTGGGGCCTATTGGGTGTATACCAAGTCAGAGGGATATGAACCCAACTGCGGGTGATGGCTGTGTCACTTTCCCCAATCAGCTAGCACAGTCATTTAATATCCAGTTGAAGGGCCTCATTGCAGAGCTCAATTCAAATCTGAAGGGTGCAATGTTTGTTTATGCAGATGTCTACAACATTTTAGGAGACATACTCAACAATTACGAAGCATATGGTTTTGAGAACCCATATTCCTCTTGTTGTTCCATGGCTGGGCGATTTGGAGGTTTGATTCCCTGTGGTCCTACTTCGATCATTTGCTGGGACAGATCCAAGTATGTGTTTTGGGACCCTTGGCATCCTACTGATGCTGCAAATGTTATCATAGCTAAGCGCCTCTTGGATGGAGAAAATAACGACATTTTCCCAATGAATGTTCGCCAACTCATTCAATATTTGACCTGA 1110 0.4117 MGIKLNRPVTVEILFQVFIVLSLFRITTSVLQPANFVFGDSLVDVGNNNYIASLSKANYVPFGIDFGRPTGRFTNGRTIVDIIGQEMGIGFTPPYLAPTTVGPVILKGVNYASGAGGILNLTGKLFGDRINFDAQLDNFANTRQDIISNIGVPTALNLFKRSIFSVAMGSNDFINNYLAPAVLIYEKNLASPELFVTTLVSRFREQLIRLFNLGARKIIVTNVGPIGCIPSQRDMNPTAGDGCVTFPNQLAQSFNIQLKGLIAELNSNLKGAMFVYADVYNILGDILNNYEAYGFENPYSSCCSMAGRFGGLIPCGPTSIICWDRSKYVFWDPWHPTDAANVIIAKRLLDGENNDIFPMNVRQLIQYLT* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1169 369 Pfam GDSL-like Lipase/Acylhydrolase 36 347 IPR001087 GO:0016788
Gso15g1169 369 SUPERFAMILY SGNH hydrolase 154 350 - -
Gso15g1169 369 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE-RELATED 22 366 - -
Gso15g1169 369 Gene3D SGNH hydrolase 32 353 IPR036514 -
Gso15g1169 369 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE SUPERFAMILY PROTEIN 22 366 - -
Gso15g1169 369 CDD SGNH_plant_lipase_like 33 351 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1169 Gso-Chr15 11458606 11460940 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1169 33 366 Acyl Lipid Metabolism Gene Families AT4G10950 35.905 1.06e-73 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1169 - - gmx:100813870 746.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1169 15 11458606 11460940 Gso9g0299 9 2874390 2876682 GST
Gso7g2020 7 44236466 44238529 Gso15g1169 15 11458606 11460940 PCT
Gso17g0277 17 2494025 2496259 Gso15g1169 15 11458606 11460940 PCT
Gso15g1169 15 11458606 11460940 Gso7g2020 7 44236466 44238529 PCT
Gso15g1169 15 11458606 11460940 Gso17g0277 17 2494025 2496259 PCT