Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1268 ATGGGCGATTTCAACCTCGCCCTGGTGATCGTGGCGGTGGTGGTGTGCGTGATCGTGTTCCTGGTGAACGTGTACCTCCTCGTGAACTACCAGCACCCCGATGACGCCAACCAGGCCTACTTCCCCAAATTCGTCGTCGTTTTGGGCCTCTCCGTCGCCGCCATCTCCATCCTCATGCTCCCCGCCGACGTCGCGAATCGCCAGGCCTGCCGCCACGCGATCTACAACGGCGCATGCAGCCTCACGCTCCCCATGAAGGACCTCTGGCTCGCCGTCTACATCCTCGACGCTGTCCTCGTCTTTTTCGTTATCCCCTTCGCCATGTTCTTCTACGAGGGCGACCAGGACAAGAGTGTGGGGAAGAGGATTAAGAGTGCGTTGATGTGGATGGTCACCACGGCTATAGTGTGCGCCCTCGTTCTGGGAATTTTGTATGGGCTGGTTGGTAAGGTGGACTTTACTATTAGGCATCTCTCTTCATCCACAACTTCATTTCCTAGCACATGGACATTCAGTAGTGGTCAACCTTGTATTGGAAGTGATGCCCATCAGTGTTCAGCATTCTCTGCTAGTCCTTCATCAGAGAAAACATGGACCATGCGTACTACCTTTCCAGAATATGTTGTTGCACTTGCTACTATTGTTGGATCTGTGCTTTTTGCTATATTTGGTGGTGTTGGTATTGCCTGTCTTCCATTAGGACTTATATTTTCATTTATTCGGCGTCCAAAGGCTGTTATCACTCGCTCGCAGTATATCAAGGAAGCCACTGAACTGGGTAAAAAAGCAAGAGAACTAAAAAAAGCAGCTGAGGCACTACATCAGGAAGAAAGAAGTGGTTCAAAGGGTAGAAAGTTTCGTAAAAATGTGAAGGAAGTTGAGAAGGAGTTGTTTCAATTAGAAGAAGATGTAAAGCTTCTTGAAGAGATGTATCCACAAGGGGAAAAGGCTGAGACAACATGGGCTCTAACAGTTCTTGGTTACCTGGCAAAATTTGTTTTGGGAATTTTAGGGTTGATTGTTTCAGTGGCGTGGGTCACTCATATAATTATCTACCTATTAATTGATCCTCCACTTTCTCCTTTCTTGAATGAAGTTTTCATTAAGCTAGATGATGTCTGGGGTCTTCTTGGCACTGCTGCATTTGCATTTTTCTGCTTCTACCTTCTCCTTGCTGTGATTGCTGGTGCCATGATGCTTGGACTGAGACTAGTATTCATTACTATACATCCCATGAAGTGGGGAGGAACTCTCATGAACTCTTTTCTGTTTAATGTGGGCCTTATTCTTCTTTGTTCCATTAGTGTGATCCAGTTCTGCTCCACAGCATTTGCCTACTATGCTCAAGCAACTGCAGCCCAGGAAATATTTGGCCACACTTTGGAGTCTCTTCGAGGAATTAAATATTTGTACAAGTACAATGTATTCCAAATTGCATTTGTTGTTTTGGCTGGATTGACCTTTGTGTATTACGCTGCCTTTGGATGGAGAAGAAAAAAGCCTAGTGGCAGGTTCCAATTGTCTACATGA 1530 0.4614 MGDFNLALVIVAVVVCVIVFLVNVYLLVNYQHPDDANQAYFPKFVVVLGLSVAAISILMLPADVANRQACRHAIYNGACSLTLPMKDLWLAVYILDAVLVFFVIPFAMFFYEGDQDKSVGKRIKSALMWMVTTAIVCALVLGILYGLVGKVDFTIRHLSSSTTSFPSTWTFSSGQPCIGSDAHQCSAFSASPSSEKTWTMRTTFPEYVVALATIVGSVLFAIFGGVGIACLPLGLIFSFIRRPKAVITRSQYIKEATELGKKARELKKAAEALHQEERSGSKGRKFRKNVKEVEKELFQLEEDVKLLEEMYPQGEKAETTWALTVLGYLAKFVLGILGLIVSVAWVTHIIIYLLIDPPLSPFLNEVFIKLDDVWGLLGTAAFAFFCFYLLLAVIAGAMMLGLRLVFITIHPMKWGGTLMNSFLFNVGLILLCSISVIQFCSTAFAYYAQATAAQEIFGHTLESLRGIKYLYKYNVFQIAFVVLAGLTFVYYAAFGWRRKKPSGRFQLST* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1268 509 Coils Coil 256 276 - -
Gso7g1268 509 PANTHER BNAC05G43630D PROTEIN 1 508 - -
Gso7g1268 509 Coils Coil 283 310 - -
Gso7g1268 509 PANTHER LIMR FAMILY PROTEIN DDB_G0283707-RELATED 1 508 - -
Gso7g1268 509 Pfam LMBR1-like membrane protein 272 487 IPR006876 -
Gso7g1268 509 Pfam LMBR1-like membrane protein 9 292 IPR006876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1268 Gso-Chr7 18027105 18038481 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1268 K14617 - gmx:100779980 961.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1615 18 47741048 47747023 Gso7g1268 7 18027105 18038481 GST
Gso7g1268 7 18027105 18038481 Gso3g0473 3 8500920 8507990 PCT
Gso3g0473 3 8500920 8507990 Gso7g1268 7 18027105 18038481 PCT