Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1615 ATGGGCGATTTCAACCTCGCCCTGGTGATCGTGGCGGTGGTGGTGTGCGTGATCGTGTTCCTGGTGAACGTGTACCTCCTCGTGAACTACCAGCACCCGGACGACGCCAACCAGGCCTACTTCCCCAAATTCGTCGTCGTTTTGGGCCTCTCCGTCGCCGCTATCTCCATCCTCATGCTCCCCGCGGACGTGGCGAATCGCCAGGCGTGCCGCCACGCGATCTACAACGGCGCGTGTAGCCTCACTCTCCCCATGAAGGACCTCTGGCTCGCAGTCTACATCCTCGACGCCGTCCTCGTCTTCTTCGTCATCCCCTTCGCCATGTTCTTCTACGAGGGCGACCAGGACAAGAGTGTGGGAAAGAGGATCAAGAGTGCTTTGTTGTGGATGGTCACCACGGCTATAGTATGCGCCCTCGTTCTGGGCATTTTGTATGGGCTCGTGGGTAAGGTGGACTTTACTGTTAGGCATCTCTCTTCATCCACAACTTCATTTCCTAGCACATGGACATTCAGTAGTGGTCAACCTTGTATCGGAAATGGTGCCCATCAGTGCTCAGCATTCTCTGCTAGTCCTTCATCAGAGAAAACATGGACCATGCGTACTACCTTTCCAGAATATGTCGTTGCACTTGCTACAATTGTTGGATCTGTGCTTTTCGCTATATTTGGTGGTGTTGGTATTGCCTGTCTTCCATTAGGACTTATATTTTCATTTATTCGGCGTCCAAAGGCTGTTATCACTCGCTCGCAGTATATCAAGGAAGCCACTGAACTGGGTAAAAAAGCTAGAGAACTAAAGAAAGCAGCTGAGGCACTCCATCAGGAAGAAAGAAGTGGTTCAAAGGGTAGAAAGTTTCGTAAAAATGTGAAGGAAGTTGAGAAGGAGTTGTTTCAATTAGAAGAAGATGTAAAGCTTCTTGAAGAGGTGTATCCACAAGGGGAAAAGGCTGAGACAACATGGGCACTAACAGTTCTTGGTTACCTGGCAAAATTTGTTTTGGGAATTTTAGGGTTGATTGTTTCAGTGGCATGGGTCGCTCATATTATTATCTACCTATTAATTGATCCTCCACTTTCTCCTTTCTTGAATGAAGTTTTCATCAAGCTAGATGATGTCTGGGGTCTTCTTGGCACTGCTGCATTTACATTTTTCTGCTTCTACCTTCTCCTTGCTGTGATTGCTGGTGCCATGATGCTTGGACTGAGACTAGTTTTCATTACTATACATCCCATGAAGTGGGGAGCAACTCTCATGAACTCTTTTCTGTTTAATGTGGGCCTTATTCTTCTTTGTTCCATTAGTGTGATCCAGTTCTGCTCCACAGCATTTGCCTACTATGCTCAAGCAACTGCAGCCCAGGAAATATTTGGTCACACTTTGGAGTCTCTTCGAGGAATTAAATATTTGTACAAGTACAATGTATTCCAAATTGCATTTGTTGTTTTGGCTGGATTGACCTTTGTGTATTACGCCGCCTTTGGATGGAGAAGAAAAAAGCCTAGTGGCAGGTTCCAATTGTCTACATGA 1530 0.4673 MGDFNLALVIVAVVVCVIVFLVNVYLLVNYQHPDDANQAYFPKFVVVLGLSVAAISILMLPADVANRQACRHAIYNGACSLTLPMKDLWLAVYILDAVLVFFVIPFAMFFYEGDQDKSVGKRIKSALLWMVTTAIVCALVLGILYGLVGKVDFTVRHLSSSTTSFPSTWTFSSGQPCIGNGAHQCSAFSASPSSEKTWTMRTTFPEYVVALATIVGSVLFAIFGGVGIACLPLGLIFSFIRRPKAVITRSQYIKEATELGKKARELKKAAEALHQEERSGSKGRKFRKNVKEVEKELFQLEEDVKLLEEVYPQGEKAETTWALTVLGYLAKFVLGILGLIVSVAWVAHIIIYLLIDPPLSPFLNEVFIKLDDVWGLLGTAAFTFFCFYLLLAVIAGAMMLGLRLVFITIHPMKWGATLMNSFLFNVGLILLCSISVIQFCSTAFAYYAQATAAQEIFGHTLESLRGIKYLYKYNVFQIAFVVLAGLTFVYYAAFGWRRKKPSGRFQLST* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1615 509 Coils Coil 256 276 - -
Gso18g1615 509 PANTHER BNAC05G43630D PROTEIN 1 508 - -
Gso18g1615 509 Coils Coil 283 310 - -
Gso18g1615 509 Pfam LMBR1-like membrane protein 270 487 IPR006876 -
Gso18g1615 509 Pfam LMBR1-like membrane protein 9 292 IPR006876 -
Gso18g1615 509 PANTHER LIMR FAMILY PROTEIN DDB_G0283707-RELATED 1 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1615 Gso-Chr18 47741048 47747023 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1615 K14617 - gmx:100816750 962.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1615 18 47741048 47747023 Gso7g1268 7 18027105 18038481 GST
Gso18g1615 18 47741048 47747023 Gso3g0473 3 8500920 8507990 PCT
Gso3g0473 3 8500920 8507990 Gso18g1615 18 47741048 47747023 PCT