Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1242 ATGGAAACAATGTTGCCTCCGAACCAAGCAGAGGAAGCAATAGTCACAACAAGCCTTAACGAGACAGAGAGTGAAGTTGGTATGAGGGAAGAAGAGAAGGAGTTGCAACAACAAGATCACTCCATGTTCAACATCAAGAGCTTCCTCTGGCATGGAGGCTCTGTTTGGGACGCATGGTTCAGCTGTGCTTCAAATCAAGTGGCTCAAGTGCTGTTGACACTGCCCTATTCTTTCTCTCAACTGGGCATGCTATCAGGAATCTTGCTTCAGATTTTCTATGGAATCTTGGGAAGTTGGACAGCGTATCTAATCAGTGTCCTCTACATGGAGTACCGTACCAGAAAGGAAAAAGAAAATGTCAGTTTCAAGAACCATGTCATTCAGTGGTTTGAAGTGCTTGATGGGTTACTGGGTCCGTATTGGAAAGCGGTGGGGTTAGCCTTCAACTGTACTTTCCTCCTCTTTGGATCTGTGATTCAGCTTATAGCATGTGCAAGTAACATCTACTACATAAATGACCACTTGGATAAACGAACTTGGACTTATATCTTTGGAGCTTGCTGTGCCACCTCTGTGTTCATACCTTCTTTTCACAATTACCGTATTTGGTCTTTTCTGGGACTTGGAATGACCACTTACACTGCTTGGTACTTGGCAATAGCAGCCCTTATTCATGGCCAGGCAGAAAATGTGACACACACGGGTCCAACGAAGCTAGTGCTGTACTTCACAGGAGCCACCAACATACTGTACACGTTTGGTGGACATGCAGTTACTGTAGAGATTATGCACGCCATGTGGAAGCCACAGAAGTTCAAGTACATATACTTGCTGGCCACTTTGTACGTTTTCACACTAACGATTCCTTCTGCTGCTGCCGTTTACTGGGCTTTTGGTGATGAACTTCTCAATCATTCCAATGCATTCTCTCTCCTCCCCAAAAATCGATTTCGTGATGCTGCTGTAATCCTCATGCTCATTCACCAGTTCATCACATTCGGTTTTGCCAGTACTCCACTGTACTTTGTCTGGGAGAAGGTAATTGGGATGCATGACACAAAGAGCATTTGCATAAGGGCACTAGCAAGGTTGCCAGTGGTGATACCCATATGGTTTTTGGCCATAATCTTCCCTTTCTTTGGGCCCATAAACTCTGCAGTTGGAGCTCTTCTCGTTAGTTTCACAGTCTACATCATCCCCGCCACAGCTCATATGCTCACTTACAGAAAAGCCTCAGCAAGACAGAATGCTGCTGAGAAGCCTCCTTTCTTTATGCCAAGCTGGACTGCAATGTATGTCTTTAATGCATTCATTGTGGTGTGGGTTTTGGTGGTTGGGTTTGGGTTTGGAGGATGGGCCAGCATGACCAACTTCATTAGGCAAATTGACACATTTGGGCTCTTTGCCAAGTGCTACCAATGCAAGGCCCCAACTCCACCACCCATGGCAGCAGCACCACCCCCTCATGCTCAACATCATCACTGA 1485 0.4586 METMLPPNQAEEAIVTTSLNETESEVGMREEEKELQQQDHSMFNIKSFLWHGGSVWDAWFSCASNQVAQVLLTLPYSFSQLGMLSGILLQIFYGILGSWTAYLISVLYMEYRTRKEKENVSFKNHVIQWFEVLDGLLGPYWKAVGLAFNCTFLLFGSVIQLIACASNIYYINDHLDKRTWTYIFGACCATSVFIPSFHNYRIWSFLGLGMTTYTAWYLAIAALIHGQAENVTHTGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLLATLYVFTLTIPSAAAVYWAFGDELLNHSNAFSLLPKNRFRDAAVILMLIHQFITFGFASTPLYFVWEKVIGMHDTKSICIRALARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPATAHMLTYRKASARQNAAEKPPFFMPSWTAMYVFNAFIVVWVLVVGFGFGGWASMTNFIRQIDTFGLFAKCYQCKAPTPPPMAAAPPPHAQHHH* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1242 494 PANTHER AUXIN INFLUX TRANSPORTER 6 477 - -
Gso7g1242 494 Pfam Transmembrane amino acid transporter protein 51 444 IPR013057 -
Gso7g1242 494 PANTHER OS05G0424000 PROTEIN-RELATED 6 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1242 Gso-Chr7 17727329 17735412 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1242 37 494 Organic Solute Cotransporters AT2G21050 78.571 0.0 761
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1242 K13946 - gmx:100776776 969.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g1242 7 17727329 17735412 Gso1g0963 1 39221451 39228988 PCT
Gso7g1242 7 17727329 17735412 Gso3g0523 3 10798222 10804653 PCT
Gso1g0963 1 39221451 39228988 Gso7g1242 7 17727329 17735412 PCT
Gso3g0523 3 10798222 10804653 Gso7g1242 7 17727329 17735412 PCT