Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0523 ATGTTGTCTCAGAAGCAAGGAGAGGACGCAATAATCACAAACCTCAACCACACAGAACATGAAGGTGGCAGCACGAGCACAAGGGAAGAAGAGGAGCAAGACCATTCCATGTTCAACTTCAAGAGCCTTTTATGGCATGGTGGTTCTGTTTGGGATGCATGGTTCAGCTGTGCTTCAAATCAAGTAGCTCAAGTGCTTTTGACACTGCCATACTCCTTCGCTCAACTTGGCATGGTATCAGGCATCTTACTTCAGATCTTCTATGGCCTTATTGGAAGCTGGACTGCTTATCTAGTCAGTGTCCTCTACATAGAGTACCGCACCAGGAAGGAAAAGGAAAATGTCAGCTTCAAGAACCACGTTATTCAGTGGTTCGAGGTCCTTGATGGGTTACTTGGTCGATATTGGAAAGCAGTGGGGCTAGCCTTCAACTGTACTTTCCTCCTATTTGGATCTGTGATACAGCTTATAGCATGTGCAAGTAACATCTATTACATAAACGACAAATTGTATAAACGGACATGGACTTATATTTTTGGAGCTTGCTGTGCATTCACTGTGTTCATACCTTCCTTCCACAATTACCGTATATGGTCTTTTTTGGGCCTTGGAATGACCACTTACACGGCTTGGTACCTTGCTATTGCAGCCATCCTTCATGGCCAGGTAGAAAATGTTACACACTCCGGTCCAACAAAGCTAATACTATACTTCACTGGAGCCACTAACATACTCTACACGTTTGGAGGACATGCTGTGACTGTGGAGATTATGCATGCCATGTGGCAGCCCCGAAAGTTCAAATCCATCTACTTTCTGGCCACTTTGTACGTTTTCACTCTAACGATCCCTTCTGCCGTCGCCGTTTATTGGTCTTTCGGTGATCAGCTCCTTGACCACTCAAATGCATTCTCTCTGCTCCCCAAGAATGTCTTCCGTGACGCCGCCGTCATCCTCATGCTCATTCACCAGTTCATCACATTTGGATTTGCGTGCACCCCATTATATTTTGTGTGGGAGAAGGTGATTGGGATGCACGACACAAAGAGCATTTGGTTAAGGGCACTTGCACGGTTTCCAGTGGTGCTACCTATATGGTTCTTGGCCATAATCTTCCCTTTCTTTGGGCCCATAAATTCAGCTGTTGGATCTCTACTCGTTAGCTTCACTGTCTACATCATCCCTGCCCTAGCCCACATGCTCACTTATAGAAATGCCTCAGCCAGACAGAATGCTGCAGAGAAGCCTCCTTTCTTCATGCCAAGCTGGACTGCAATGTATGTCTTCAATGCATTCATTATTGGATGGGTTTTGGTGGTTGGATTTGGGCTTGGAGGATGGGCCAGCATGATCAACTTGATAAACCAAATTGACACATTTGGACTTTTTGCCAAATGCTACCAATGCCCTGAACCACCGCCACCTGCTGGAGCACCACCCCCTCTTACCCATCCAGTGGTGGAGGGAGGGGTTGACCTTGTAGAACCATGGGCACCTCCAAACTTGTTGAAGATTATTTAA 1521 0.4622 MLSQKQGEDAIITNLNHTEHEGGSTSTREEEEQDHSMFNFKSLLWHGGSVWDAWFSCASNQVAQVLLTLPYSFAQLGMVSGILLQIFYGLIGSWTAYLVSVLYIEYRTRKEKENVSFKNHVIQWFEVLDGLLGRYWKAVGLAFNCTFLLFGSVIQLIACASNIYYINDKLYKRTWTYIFGACCAFTVFIPSFHNYRIWSFLGLGMTTYTAWYLAIAAILHGQVENVTHSGPTKLILYFTGATNILYTFGGHAVTVEIMHAMWQPRKFKSIYFLATLYVFTLTIPSAVAVYWSFGDQLLDHSNAFSLLPKNVFRDAAVILMLIHQFITFGFACTPLYFVWEKVIGMHDTKSIWLRALARFPVVLPIWFLAIIFPFFGPINSAVGSLLVSFTVYIIPALAHMLTYRNASARQNAAEKPPFFMPSWTAMYVFNAFIIGWVLVVGFGLGGWASMINLINQIDTFGLFAKCYQCPEPPPPAGAPPPLTHPVVEGGVDLVEPWAPPNLLKII* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0523 506 Pfam Transmembrane amino acid transporter protein 46 439 IPR013057 -
Gso3g0523 506 PANTHER AUXIN TRANSPORTER-LIKE PROTEIN 4 2 472 - -
Gso3g0523 506 PANTHER OS05G0424000 PROTEIN-RELATED 2 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0523 Gso-Chr3 10798222 10804653 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0523 4 469 Organic Solute Cotransporters AT2G21050 74.678 0.0 741
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0523 K13946 - gmx:100809138 1011.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g0523 3 10798222 10804653 Gso3g0523 3 10798222 10804653 ECH
Gso1g0963 1 39221451 39228988 Gso3g0523 3 10798222 10804653 GST
Gso7g1242 7 17727329 17735412 Gso3g0523 3 10798222 10804653 PCT
Gso3g0523 3 10798222 10804653 Gso7g1242 7 17727329 17735412 PCT