Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0963 ATGTTGTCTCAGAAGCAAGCAGAGGAAGCCATAGTCACAAACGAGACAGAACATAAAGTTGGCAGCACTAGGGAAGAAGAGAAGGAGCAAGGCCACTCCATTTTCAGCCTCAAGAGCATCCTTTGGCATGGTGGTTCTGTTTGGGATGCATGGTTTAGCTGTGCTTCAAATCAAGTGGCTCAAGTGCTCTTGACACTGCCATGCTCCTTCTCTCAACTTGGCATGCTATCAGGAATCATTTTTCAGGTGTTCTATGGAATTATTGGAAGCTGGACTGCTTATCTAATCAGTGTTCTCTACATAGAGTACCGCACCAGAAAGGAAAAGGAAAACGTCAACTTCAAAAATCATGTCATCCAGTGGTTCGAAGTCCTTGATGGGTTACTTGGTCCATATTGGAAAGCATTGGGGCTAGCCTTCAACTGTACTTTCCTCCTCTTTGGATCTGTGATACAGCTTATAGCATGTGCAAGTAACATCTACTACATAAATGACAAATTGGATAAACGGACTTGGACTTATATTTTTGGAGCTTGCTGTGCCACCACTGTTTTCATACCTTCCTTCCACAATTACCGAATCTGGTCTTTTTTGGGTCTTGGAATGACCACTTACACGGCTTGGTACCTTGCTGTTGCAGCCATCCTTCATGGCCAGGTGGAAAATGTCACGCACACGGGTCCAACAAAGCTAGTGTTATACTTCACTGGAGCCACTAACATCCTCTACACGTTTGGAGGACATGCTGTGACTGTAGAGATTATGCATGCCATGTGGAAGCCCCAAAAGTTCAAGTACATCTACTTGCTGGCCACTTTGTACGTTTTCACGCTAACGATTCCGTCAGCTGTCGCCGTTTATTGGGCTTTCGGTGATATGCTTCTTAACCACTCCAACGCATTCTCTCTCCTCCCCAAGAATGGCTTCCGTGACGCCGCCGTTATCCTCATGCTCATTCACCAGTTCATCACATTTGGATTTGCGTGTACTCCGTTGTACTTCGTGTGGGAGAAGGTGATTGGGATGCACGACACAAAGAGCATTTGTTTGAGGGCACTTGCACGGTTGCCAGTGGTGATACCTATATGGTTCTTGGCCATAATCTTCCCATTCTTTGGGCCCATAAATTCAGCTGTTGGATCTCTACTAGTTAGCTTCACTGTCTACATCATCCCTGCCCTAGCCCATATGCTCACTTACAGAAAAGCCTCTGCCAGACAGAATGCTGCAGAGAGGCCTCCTTTCTTCATGCCAAGCTGGACTGTAATGTATGTCTTCAATGCATTCATTGTGGTATGGGTTTTTGTAGTTGGATTTGGGCTTGGAGGATGGGCCAGCATGACCAACTTCATAAGGCAAATTGACACATTTGGGCTTTTTGCTAAATGCTACCAATGCCTTCCACCAGCACCAAAAGTTGTGGCAGCACCACCCCCTCATGCTCATCATTAG 1452 0.4601 MLSQKQAEEAIVTNETEHKVGSTREEEKEQGHSIFSLKSILWHGGSVWDAWFSCASNQVAQVLLTLPCSFSQLGMLSGIIFQVFYGIIGSWTAYLISVLYIEYRTRKEKENVNFKNHVIQWFEVLDGLLGPYWKALGLAFNCTFLLFGSVIQLIACASNIYYINDKLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLAVAAILHGQVENVTHTGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLLATLYVFTLTIPSAVAVYWAFGDMLLNHSNAFSLLPKNGFRDAAVILMLIHQFITFGFACTPLYFVWEKVIGMHDTKSICLRALARLPVVIPIWFLAIIFPFFGPINSAVGSLLVSFTVYIIPALAHMLTYRKASARQNAAERPPFFMPSWTVMYVFNAFIVVWVFVVGFGLGGWASMTNFIRQIDTFGLFAKCYQCLPPAPKVVAAPPPHAHH* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0963 483 Pfam Transmembrane amino acid transporter protein 43 436 IPR013057 -
Gso1g0963 483 MobiDBLite consensus disorder prediction 1 27 - -
Gso1g0963 483 PANTHER OS05G0424000 PROTEIN-RELATED 2 470 - -
Gso1g0963 483 MobiDBLite consensus disorder prediction 11 27 - -
Gso1g0963 483 PANTHER AUXIN INFLUX TRANSPORTER 2 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0963 Gso-Chr1 39221451 39228988 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0963 3 466 Organic Solute Cotransporters AT2G21050 78.664 0.0 766
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0963 K13946 - gmx:100778756 941.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0963 1 39221451 39228988 Gso3g0523 3 10798222 10804653 GST
Gso7g1242 7 17727329 17735412 Gso1g0963 1 39221451 39228988 PCT
Gso1g0963 1 39221451 39228988 Gso7g1242 7 17727329 17735412 PCT