Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1210 ATGCCCACTTCAATTATGGCTCCATTTTCCACTTCCCACCACTTCACAGCCTTCACCTTCCTCATCTTGTTCCTCAAAACCCAAGCTTTTGATCCACTCTCTTCCTTTTCCTTCACAGATTTTCAGAAAGATCCAAATTTTAAGTCAAGTGTGGGGCTTTATGGCAATGCAAAAGTTGTCTATAATGGTTCTGAGGTTCTTCTTTCTGGTAATGGTGGTGGGAGAGTCATGTACAAGAAGCCCTTCAAGCTTGTTCATGGTGAAGCAAGGGAATTGGTCTCATTTTCAACCTACTTTGGGTTTTCAATGTCCTTGGATAGTGAGAAGAATGGCTTGGCTTTTGTTATGGTTCCAAGTGGTATTGAAGGTGAGGTTTTTGGCAATAGTTCATATGGGTTTTCTTTTGGATTGAAGGAAAGGGAATTTAAGGTTATTGGTGTTCAGTTTAGTGCTTATGGTAGGAATGGGGGTTCTGGTAGTTGTATTGTGTCCATTAATGTTGGTAGTTCTGTTCCTGTTAAAACAATCAATGCCTCCTCTGTCATTATGGGTCTAAAAAGTGAGGGGAAATTGCATGCTTGGATTGATTATGAGGCGAGTTCAAAGCGCTTAGAAGTTAGGTTGAATCAATTTGGTCAATCAAGGCCAGTTGATCCATTGCTTTGGCATTCAATGGACTTATCAAATGTTTGGGGGACTGAAGAGATGTTTGCAGGCTTTAGCACAGTGAAAGGGAATAATACTTCTCAATCATGCTTTCTCTATTCATGGAGCTTTATTGTGAGGCATTTTCCACATTGGATGCATTCTGAGCCTCTGGATCCAAAGTTTCTTGCTAAGAAGACCGAAACTCCAACAGTGAAATATTATAGGAGTTTTTGCCTTTTGAGGGTTCTTGCTGCAATGATATTTGGTGCTGGATGTGGAGCTTTGACAGCATTCATTGTGCTCTATTTGTGGACCATCTTTGGTAATAAACGACCCGTGGTGCCAGAGGAGTATGCTATGCAGCCTGTAGATTTTGATTACAAGAAAGTGAACATTGTTGTAGATAAAACCATCATAGACGCTAAGGAGTAG 1080 0.4074 MPTSIMAPFSTSHHFTAFTFLILFLKTQAFDPLSSFSFTDFQKDPNFKSSVGLYGNAKVVYNGSEVLLSGNGGGRVMYKKPFKLVHGEARELVSFSTYFGFSMSLDSEKNGLAFVMVPSGIEGEVFGNSSYGFSFGLKEREFKVIGVQFSAYGRNGGSGSCIVSINVGSSVPVKTINASSVIMGLKSEGKLHAWIDYEASSKRLEVRLNQFGQSRPVDPLLWHSMDLSNVWGTEEMFAGFSTVKGNNTSQSCFLYSWSFIVRHFPHWMHSEPLDPKFLAKKTETPTVKYYRSFCLLRVLAAMIFGAGCGALTAFIVLYLWTIFGNKRPVVPEEYAMQPVDFDYKKVNIVVDKTIIDAKE* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1210 359 PANTHER CONCANAVALIN A-LIKE LECTIN FAMILY PROTEIN 6 358 - -
Gso7g1210 359 Pfam Legume lectin domain 35 270 IPR001220 GO:0030246
Gso7g1210 359 SUPERFAMILY Concanavalin A-like lectins/glucanases 35 267 IPR013320 -
Gso7g1210 359 Gene3D - 33 262 - -
Gso7g1210 359 PANTHER LEGUME LECTIN BETA DOMAIN PROTEIN 6 358 - -
Gso7g1210 359 CDD lectin_legume_LecRK_Arcelin_ConA 35 259 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1210 Gso-Chr7 17038448 17040021 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1210 65 241 Receptor kinase-like Gene Family AT5G03140 29.843 8.89e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1210 - - gmx:100815991 710.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1558 18 46419678 46421234 Gso7g1210 7 17038448 17040021 GST
Gso7g1210 7 17038448 17040021 Gso1g0911 1 37092791 37094380 PCT
Gso7g1210 7 17038448 17040021 Gso3g0651 3 19889616 19891165 PCT
Gso1g0911 1 37092791 37094380 Gso7g1210 7 17038448 17040021 PCT
Gso3g0651 3 19889616 19891165 Gso7g1210 7 17038448 17040021 PCT