Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0911 ATGGCACCATTTCCCACTTCCCATTATTACTTCAGGGCCTTCACTTTCTCCATTTTGTTCCTCAAAACCCTAGCTTTTGACCCAATTCCTCTGTTTTATTATGCTGGCTTTGGAAAAGATCTGAAATTTACGCCCAACGTGGCCCTTTTTGGTAATGCAAAGGTTCTCAACGAAGGGTCTGGGATTCATTTCTCTGGCTCTGGGAGTTCAGGAGACACTGGGAGAGTCATGTACAAGAAACCCATCAAGCTTTTTCAAGGTAAACCAAGGCAATTAGTGTCTTTTTCTACTTACTTTGCATTTTCAGTCTCATTGGAAGATGGGGGTGGCTTGGCTTTTGTTATGGCTCCAAAGGGTTCTGAAGGTGATATGTTTTATCAAAGTTCTTATGGGTTGAATAGTAGAAAATTTGAAGTTGTTGGTGTTGAGTTTAGTGCCTCAAAGGGTGGTAGAAAAGGGGTTTCTTCTAGTTGTCATGTCAACATGAATATTGGTGGTTTTGTTGCTAAAAAAAGTAACACCTCTATTGGAGAAAAGTTGCATGTTTGGATTGACTATGAAGCTAGTTCAAGGCGCTTAGAAGTGAGACTGAGTCAGCATGGTAAATCGAGGCCATCTTATCCATTGCTGTGGCAATCAATTGACTTGTCAAATGTGTTGAAGGAGAAAGAAATGTTGGTGGGTTTTAGTTCTGTGAAGGGGAATGACTCTCAAGCATGCTTTCTCTATTCATGGAGCTTTGTTCTGAGGAATTTCCCACATTCGATGCATTCAGAGCCCTTGGATCCAAAGGTCTTTGTCAAAAACACTGAAAGTCCAGTGGTTAAACAAAGGAGTGATTGCTTTTTGAGAGTTCTTGCTGCAATGATATTTGGTACTGGATGTGGAGCTTTGACAGCATTTATTGTGCTTTACTTGTGGACCATCTTTGGCAACAATAAACGTGCTGTGGTGCCAGAGGAATCTGTTGTGCAACCTGTAGATGTTGAATATAGGAAAAATGTCAGAATTGTTGTAGATAAAACCATCGAAGATGGTAAGAAGTAG 1047 0.4069 MAPFPTSHYYFRAFTFSILFLKTLAFDPIPLFYYAGFGKDLKFTPNVALFGNAKVLNEGSGIHFSGSGSSGDTGRVMYKKPIKLFQGKPRQLVSFSTYFAFSVSLEDGGGLAFVMAPKGSEGDMFYQSSYGLNSRKFEVVGVEFSASKGGRKGVSSSCHVNMNIGGFVAKKSNTSIGEKLHVWIDYEASSRRLEVRLSQHGKSRPSYPLLWQSIDLSNVLKEKEMLVGFSSVKGNDSQACFLYSWSFVLRNFPHSMHSEPLDPKVFVKNTESPVVKQRSDCFLRVLAAMIFGTGCGALTAFIVLYLWTIFGNNKRAVVPEESVVQPVDVEYRKNVRIVVDKTIEDGKK* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0911 348 SUPERFAMILY Concanavalin A-like lectins/glucanases 32 247 IPR013320 -
Gso1g0911 348 PANTHER LEGUME LECTIN BETA DOMAIN PROTEIN 1 348 - -
Gso1g0911 348 CDD lectin_legume_LecRK_Arcelin_ConA 32 247 IPR001220 GO:0030246
Gso1g0911 348 Pfam Legume lectin domain 32 258 IPR001220 GO:0030246
Gso1g0911 348 PANTHER CONCANAVALIN A-LIKE LECTIN FAMILY PROTEIN 1 348 - -
Gso1g0911 348 Gene3D - 31 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0911 Gso-Chr1 37092791 37094380 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0911 18 304 Receptor kinase-like Gene Family AT5G60270 27.244 5.62e-16 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0911 - - gmx:100816374 695.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0911 1 37092791 37094380 Gso3g0651 3 19889616 19891165 GST
Gso18g1558 18 46419678 46421234 Gso1g0911 1 37092791 37094380 PCT
Gso7g1210 7 17038448 17040021 Gso1g0911 1 37092791 37094380 PCT
Gso1g0911 1 37092791 37094380 Gso18g1558 18 46419678 46421234 PCT
Gso1g0911 1 37092791 37094380 Gso7g1210 7 17038448 17040021 PCT