Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1558 ATGCCCACTTCAATTATGGCTCCATTTTCCACTTCCCCCCACTTCACAGCCTTCACCTTCCTCATCTTGTTCCTCAAAACACAAGCTTTTGATCCACTCTCTTTCTTTTCCTTCACGGATTTTGAGAAAGATCCAAATTTTAAGTCAAGTGTGGGGCTTTATGGCAATGCAAAAGTTGTCAATAATGGTTCTGAGGTTCTTCTTTCTGGGAATGGTGGGAGAGTCATCTACAAGAAGCCCGTCAAGCTTGTTCATAGTGGAGCAAGGGAATTGGTCTCATTTTCAACTTACTTTGGGTTTTCAATGTCCTTGGATAGTGAGAAGAGTGGCTTGGCTTTTGTTATGGTTCCAAGTGGTGTTGAAGGTGAGGTTTTTGGTAATAGTTCATATGGGCTTTCTTTTGGATTGAAGGAAAGGGAATTTAAGGTTGTAGGTGTTCAGTTTAGTGCTTATGGTAGGAATGGGGGTTCTGGTAGTTGTATTGTGTCCATTAATGTTGGTAGTTCTGTTCCTGTTAAAACAATCAATGCCTCATCTGTCATTATGGGTCTAAAAAGTGAGGGGAAATTGCATGCTTGGATTGATTATGAGGCGAGTTCAAAGCGCTTAGAAATTAGGTTGAATCAATATGGTCAATCAAGGCCAGTTGATCCATTGCTTTGGCATTCAATGGACTTATCAAATGTTTGGGGTACTGAAGAGATGTTTGCAGGCTTTAGCACAGTGAAAGAGAATAATACTTCTCAAACATGCTTTCTCTATTCATGGAGCTTTATTGTGAGGCATTTTCCACATTGGATGCATTCTGAGCCTCTGAATCCAAAGGTCCTTGCTAAGAAGACTGAAACTCCAGCAGTGAAATCCAGAAGTGATTGCCTTTTGAGGGTTCTTGCTGCAATGATATTTGGTGCTGGATGTGGAGCATTGACAGCATTCATTGTGCTTTATTTGTGGACCATCTTTGGTAATAAACGACCGGTGGTGCCGGAGGAGTATGCTATGCAGCCTGTAGATTTTGAGTACAAGAAAGTGAGCATTGTTGTAGATAAAACAACCATCATAGATGCTAAGGAGTAG 1077 0.4113 MPTSIMAPFSTSPHFTAFTFLILFLKTQAFDPLSFFSFTDFEKDPNFKSSVGLYGNAKVVNNGSEVLLSGNGGRVIYKKPVKLVHSGARELVSFSTYFGFSMSLDSEKSGLAFVMVPSGVEGEVFGNSSYGLSFGLKEREFKVVGVQFSAYGRNGGSGSCIVSINVGSSVPVKTINASSVIMGLKSEGKLHAWIDYEASSKRLEIRLNQYGQSRPVDPLLWHSMDLSNVWGTEEMFAGFSTVKENNTSQTCFLYSWSFIVRHFPHWMHSEPLNPKVLAKKTETPAVKSRSDCLLRVLAAMIFGAGCGALTAFIVLYLWTIFGNKRPVVPEEYAMQPVDFEYKKVSIVVDKTTIIDAKE* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1558 358 Gene3D - 34 261 - -
Gso18g1558 358 SUPERFAMILY Concanavalin A-like lectins/glucanases 36 266 IPR013320 -
Gso18g1558 358 Pfam Legume lectin domain 36 270 IPR001220 GO:0030246
Gso18g1558 358 PANTHER LEGUME LECTIN BETA DOMAIN PROTEIN 6 357 - -
Gso18g1558 358 PANTHER CONCANAVALIN A-LIKE LECTIN FAMILY PROTEIN 6 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1558 Gso-Chr18 46419678 46421234 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1558 15 247 Receptor kinase-like Gene Family AT5G03140 28.800 4.01e-12 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1558 - - gmx:100800406 719.539
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1558 18 46419678 46421234 Gso7g1210 7 17038448 17040021 GST
Gso18g1558 18 46419678 46421234 Gso1g0911 1 37092791 37094380 PCT
Gso18g1558 18 46419678 46421234 Gso3g0651 3 19889616 19891165 PCT
Gso1g0911 1 37092791 37094380 Gso18g1558 18 46419678 46421234 PCT
Gso3g0651 3 19889616 19891165 Gso18g1558 18 46419678 46421234 PCT