Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1176 ATGGAGAAGAAGGTTAGTCTTGAAGTGAAACCAGAAGAGGGTGATGAGGTGAAATGGGTTCTTGATTCTTCAGTGGACCACAAAGGCAGGGTTCCACTCAGAGCTTCAACTGGTTCTTGGAAAGCTGCTCTCTTCATTATTGCTATTGAGACTAGCGAGAGATTGAGCTACTTCGGAATAGCAACTAGTTTGGTCCTTTACCTCACAAAGGTTATGCATCAAGAACTCAAAACAGCAGCAAGAAATGTGAACTACTGGGCTGGTGTCACAACTTTGATGCCACTGTTTGGTGGATTCATAGCTGATGCATATTTGGGCCGTTACTCCACTGTGCTGGCATCATCCATTGTTTATCTCATTGGTTTGGTTCTCCTTACTCTGTCTTGGTTCTTACCAAGCTTAAAGCCATGTGATGGCACAGACATGTGCACTGAACCAAGGAGAATTCATGAAGTGGTTTTCTTCCTGGCCATTTACCTTATATCTTTTGGAACTGGAGGGCACAAACCCTCCTTGGAGAGCTTTGGAGCTGACCAATTTGATGAGGATCATGATGGAGAAAGGAGACAAAAAATGTCCTTTTTCAATTGGTGGAATTGTGCTCTATGCAGTGGACTTATTGTTGGAGTGACCCTCATTGTTTACATACAAGACAACATAAACTGGGGAGCTGCTGATATTATCTTCACAGTGGTCATGGCCTTTTCACTGCTCATCTTCATAATTGGAAGGCCATTTTATCGTTATAGGGTACCAACTGGGAGTCCCTTAACTCCAATGTTGCAAGTTCTTGTCGCTGCCATTTCCAAAAGAAAGCTTCCATATCCTTCTAATCCTGATCAATTGTATGAGGTTCCCAAGTATAACAGCAACAATAGAAGATATCTGTGTCACACTAACAAACTCAAATTTCTTGACAAGGCAGCAATTCTTGTTGATGATGGAAGTTCAGCAGAGAAGCAGAGTCCATGGAACCTAGCAACTGTAACTAAGGTTGAAGAAATGAAGCTTATTATCAACATTATCCCCATTTGGGTATCCACCATACCATTTGGTATGTGTGTAGCACAAACAGCTACATTCTTCGTCAAACAAGGCACCCAGTTGAACAGAAAGATAGGTGAAGGGTTTGAGATTCCTCCAGCTTCAATCTTCACAGTTGCTGCATTGGGAATGGTAGTTTCTGTGGCCATATATGACAAGATTCTTGTGCCTGCGTTAAGAAGGGTAACACAAAACGAGAGAGGAATCAACATTCTTCAGAGGATTGGCTTTGGAATGCTCTTCTCTATTGCTACAATGATAGTAGCAGCTTTGGTGGAGAAAAAAAGGCTTGAGGCTGTTGAGAGGGACCCCTTGAAGGGTTCACTAACAATGAGTGTGTTCTGGTTGGCACCACAGTTTCTCATTATTGGTTTTGGTGATGGTTTTACTCTTGTGGGTTTGCAAGAGTACTTTTATGATCAAGTTCCTGACTCAATGAGAAGCCTAGGCATAGCATTTTACCTTAGTGTAATTGGTGCAGCGAGTTTCCTAAGTAGTATGCTGATAACAGTTGTTGATCACATCACTAAGAAGAGTGGGAAAAGTTGGTTTGGTAAGGACTTGAATAGTAGTCGATTGGACAAATTCTATTGGCTATTGGCAGCCATAGCCACGGTGAATTTGTTCTTGTTTGTGTTTGTTGCCCGTCGATATTCCTACAAAAATGTGCAAAAGTTAGCAGTGGCTGATTGCTATGAAGGCAAAAGTGACTGTGAGGGGGTGGAAACCAAGGTTTAG 1782 0.422 MEKKVSLEVKPEEGDEVKWVLDSSVDHKGRVPLRASTGSWKAALFIIAIETSERLSYFGIATSLVLYLTKVMHQELKTAARNVNYWAGVTTLMPLFGGFIADAYLGRYSTVLASSIVYLIGLVLLTLSWFLPSLKPCDGTDMCTEPRRIHEVVFFLAIYLISFGTGGHKPSLESFGADQFDEDHDGERRQKMSFFNWWNCALCSGLIVGVTLIVYIQDNINWGAADIIFTVVMAFSLLIFIIGRPFYRYRVPTGSPLTPMLQVLVAAISKRKLPYPSNPDQLYEVPKYNSNNRRYLCHTNKLKFLDKAAILVDDGSSAEKQSPWNLATVTKVEEMKLIINIIPIWVSTIPFGMCVAQTATFFVKQGTQLNRKIGEGFEIPPASIFTVAALGMVVSVAIYDKILVPALRRVTQNERGINILQRIGFGMLFSIATMIVAALVEKKRLEAVERDPLKGSLTMSVFWLAPQFLIIGFGDGFTLVGLQEYFYDQVPDSMRSLGIAFYLSVIGAASFLSSMLITVVDHITKKSGKSWFGKDLNSSRLDKFYWLLAAIATVNLFLFVFVARRYSYKNVQKLAVADCYEGKSDCEGVETKV* 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1176 593 Pfam POT family 108 528 IPR000109 GO:0016020|GO:0022857|GO:0055085
Gso7g1176 593 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 1. 97 121 IPR018456 GO:0006857|GO:0016020|GO:0022857
Gso7g1176 593 PANTHER PROTEIN NRT1/ PTR FAMILY 5.6 22 578 - -
Gso7g1176 593 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 22 578 IPR000109 GO:0016020|GO:0022857|GO:0055085
Gso7g1176 593 CDD MFS_NPF5 40 568 IPR044739 GO:0042937|GO:0042938|GO:0071916
Gso7g1176 593 SUPERFAMILY MFS general substrate transporter 34 569 IPR036259 -
Gso7g1176 593 Gene3D MFS general substrate transporter like domains 12 575 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1176 Gso-Chr7 16493863 16501010 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1176 2 587 Organic Solute Cotransporters AT3G53960 61.864 0.0 777
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1176 - - gmx:100801757 1181.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g1176 7 16493863 16501010 Gso1g0870 1 35221618 35228257 PCT
Gso7g1176 7 16493863 16501010 Gso3g0603 3 17380193 17389123 PCT
Gso1g0870 1 35221618 35228257 Gso7g1176 7 16493863 16501010 PCT
Gso3g0603 3 17380193 17389123 Gso7g1176 7 16493863 16501010 PCT