Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0870 ATGGAGAAGAACAAAGTTGATGCAAATCCTGAGGAATTTAACGATGAGATGAAATGGGTTCGTGATTCTTCATTGGATCACAAAGGAAGAGTTCCTCTCCGAGCTTCAACTGGTTCTTGGAAAGCTTCTATCTTCATTATTGCAATTGAGTTTAGTGAGAGATTGAGCTATTTTGGAATAGCAACTAGCTTGGTCATTTACCTTACAAAAGTTCTTCATCAAGACCTTAAGACAGCAGTTAAGAATGTGAACTATTGGTCTGGTGTCACCACTTTGATGCCATTGTTAGGAGGATTCCTAGCTGATGCTTACTTAGGCCGTTACACCACTGTGATAACATCATGCATCGTTTATCTCATGGGTTTGGTTCTGCTTTCTTTGTCATGGTTCATACCAGGTTTCAAACCATGTGATCATACTAGTACATGCACCGAACCTAGGAGGATTCATGAGGTGGTTTTCTTCCTAGGCATCTATTTAATATCAGTAGGAACTGGAGGGCATAAACCTTCCTTGGAGAGCTTTGGTGCTGATCAATTTGATGATAATAATGCCAAAGAAAGAAGGCAGAAAATGTCCTTTTTCAACTGGTGGAACAGTGGTTTGTGTAGTGGAATCATTCTAGGAGTGACTGTGATTGTGTATGTGCAAGACCATGTCAATTGGGGGGTTGCTGATATCATCCTCACAGGAGTCATGGCTGTCTCATTGCTCATATTCTTGATTGGAAGGTCCTCTTACCGTTACAGGACACCAATTGGGAGCCCCTTGACTCCTATGTTGCAAGTTCTTGTTGCTGCTATTTCCAAAAGAAAGCTTCCATATCCTTCCAATCCAACTCAATTGTATGAAGTTTCCAAGTCTGAGGGCAACAATGAAAGATTTCTGGCTCACACCAAGAAACTCAAATTTCTTGACAAGGCAGCAATTATTGAAAATGAAGGGAACATAGCAGAGAAACAGAGTCCATGGAGACTTGCAACAGTAACTAAGGTTGAAGAACTGAAACTAATCATCAACATGATCCCCATTTGGGTGTTCACATTACCATTTGGAATATGTGCTTCCCAAACCTCTACTTTCTTCATCAAGCAAGGTGCCATCATGAACAGAAAAATAGGCAATGGATTTGTGGTTCCCCCAGCTTCAATTTTCACTCTTGCAGCCATAGGGATGATAGTTTCAGTGATCATCTATGACAAGCTCCTTGTGCCAGTGCTAAGAAAACTAACAGGAAATGAGAGAGGAATCAACATCCTCCAAAGGATTGGCATTGGAATGATCTTCTCAGTCATCACAATGATAGCTGCAGCTTTGGTGGAAAAGAAGAGGCTTGAGGCTGTTGAGATGAATGGCCCATTAAAGGGTTCTTTGTCAATGAGTGCCCTTTGGTTGGCCCCACAATTTCTCATCATTGGATTTGGTGATGGGTTTGCTCTTGTGGGCTTGCAAGAGTATTTCTATGACCAAGTGCCAGACTCAATGAGAAGCCTTGGAATAGCACTTTACCTTAGTGTCATTGGAGCTGCAAGTTTTCTTAGTAGTTTATTAATAACAATTGTGGATCATGTCACAGGCAAGAGTGGGAAGAGTTGGATTGGCAAGGATTTGAATAGTAGCCGCTTGGACAAATTTTATTGGCTTCTTGCAGCCATCACCACATTGAACTTGTTCGTGTTTGTGTTCTTTGCTCGCAGATATAACTACAAGAATGTGCAAAAGGTGGCAGTGGCTGATTGCTATGAAGGCAAAAGTGATGATGGTGGACCAGAGACTAAGGTTTGA 1785 0.4157 MEKNKVDANPEEFNDEMKWVRDSSLDHKGRVPLRASTGSWKASIFIIAIEFSERLSYFGIATSLVIYLTKVLHQDLKTAVKNVNYWSGVTTLMPLLGGFLADAYLGRYTTVITSCIVYLMGLVLLSLSWFIPGFKPCDHTSTCTEPRRIHEVVFFLGIYLISVGTGGHKPSLESFGADQFDDNNAKERRQKMSFFNWWNSGLCSGIILGVTVIVYVQDHVNWGVADIILTGVMAVSLLIFLIGRSSYRYRTPIGSPLTPMLQVLVAAISKRKLPYPSNPTQLYEVSKSEGNNERFLAHTKKLKFLDKAAIIENEGNIAEKQSPWRLATVTKVEELKLIINMIPIWVFTLPFGICASQTSTFFIKQGAIMNRKIGNGFVVPPASIFTLAAIGMIVSVIIYDKLLVPVLRKLTGNERGINILQRIGIGMIFSVITMIAAALVEKKRLEAVEMNGPLKGSLSMSALWLAPQFLIIGFGDGFALVGLQEYFYDQVPDSMRSLGIALYLSVIGAASFLSSLLITIVDHVTGKSGKSWIGKDLNSSRLDKFYWLLAAITTLNLFVFVFFARRYNYKNVQKVAVADCYEGKSDDGGPETKV* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0870 594 CDD MFS_NPF5 40 569 IPR044739 GO:0042937|GO:0042938|GO:0071916
Gso1g0870 594 Gene3D MFS general substrate transporter like domains 12 576 IPR036259 -
Gso1g0870 594 PANTHER PEPTIDE/NITRATE TRANSPORTER PLANT 22 584 - -
Gso1g0870 594 Pfam POT family 108 527 IPR000109 GO:0016020|GO:0022857|GO:0055085
Gso1g0870 594 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 22 584 IPR000109 GO:0016020|GO:0022857|GO:0055085
Gso1g0870 594 SUPERFAMILY MFS general substrate transporter 34 570 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0870 Gso-Chr1 35221618 35228257 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0870 1 586 Organic Solute Cotransporters AT3G53960 65.144 0.0 813
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0870 - - gmx:100806045 1180.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0870 1 35221618 35228257 Gso3g0603 3 17380193 17389123 GST
Gso7g1176 7 16493863 16501010 Gso1g0870 1 35221618 35228257 PCT
Gso1g0870 1 35221618 35228257 Gso7g1176 7 16493863 16501010 PCT