Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0603 ATGGAGAAGAACAAAGTTGATGAAAATCCTGAAGAATTTAACTATGAGATGAAATGGGTTCGTGATTCTTCATTGGATCACAAAGGAAGAGTTCCTCTCCGAGCTTCAACTGGTTCTTGGAAAGCTTCTCTCTTCATCATTGCAATTGAGTTTAGTGAGAGATTGAGCTACTTTGGAATAGCTACTAGCTTGGTCATTTACCTTACGAAAGTTCTTCATCAAGACCTTAAGACAGCAGTTAAAAATGTGAACTATTGGTCTGGTGTCACCACCTTGATACCATTGTTAGGAGGATTCCTAGCTGATGCTTACTTAGGCCGTTACACCGCTGTGATAGCATCATGCATTGTTTATCTCATGGGTTTGGTTCTGCTTTCTTTGTCATGGTTCTTACCAGGTTTCAAACCTTGTGATCATCCCAGTACATGCACCGAACCTAGGAGGATTCATGAGGTGGTTTTCTTCCTAGGCATCTATTTAATATCCGTAGGAACTGGGGGCCATAAACCTTCCTTGGAGAGCTTTGGCGCCGATCAATTTGATGATAATAATGCCAAAGAAAGAAGTCAGAAAATGTCCTTTTTCAACTGGTGGAACAGTGGTTTGTGTAGTGGAATCATTCTAGGAGTGACTGTGATTGTGTATGTTCAAGACCATGTCAATTGGGGGGTTGCTGATATCGTCCTCACAGGGGTCATGGCTGTCTCATTGCTCATATTCTTGATTGGAAGGTCTTCTTATCGTTACAGGACACCAATTGGGAGCCCCTTGACTCCTATGTTGCAAGTTATTGTTGCTGCTATTTCCAAAAGAAAGCTTCCATATCCTTCCAATCCAACTCAATTGTATGAAGTTTCCAAGTCTGAGGGCAACAGTGAAAGATTTCTGGCTCACACCAAGAAACTCAAATTTCTTGACAAGGCAGCAATCCTTGAAAATGAAGGGAACATAGCAGAGAAACAGAGTCCATGGAGACTTGCAACAGTAACCAAGGTTGAAGAACTGAAGCTTATCATCAACATGATCCCCATTTGGGTGTTCACATTACCATTTGGAATCTGTGCTTCCCAAACCTCCACTTTCTTCATCAAACAAGGTGCCATCATGAACAGAAATATAGGCAATAATGGATTTGTGGTTCCCCCAGCTTCAATTTTCACTCTTGCAGCCGTTGGGATGATACTTTCAGTGACCATCTATGACAAGCTCCTTGTGCCAGTGCTAAGAAAACTAACAGGAAATGACAGAGGAATCAGCATCCTCCAAAGGATTGGTATTGGAATGGTCTTCTCAGTCATCACAATGATAGTGGCAGCTTTGGTGGAAAAAAAGAGGCTTGAGGCAGTTGAAATGAATGGCCCATTAAAGGGTTCTTTGTCCATGAGTGCCCTTTGGTTGGCCCCACAATTTATGATCATTGGATTTGGTGATGGGTTTGCTCTTGTGGGCTTGCAAGAGTATTTCTATGACCAAGTGCCTGACTCAATGAGAAGCCTTGGAATAGCACTTTACCTTAGTGTCATTGGGGCTGCAAGTTTTCTTAGTAGTTTATTAATAACAATTGTGGATCATGTCACTGGTAAGATTGGGAAGAGTTGGATTGGTAAGGATTTGAATAGTAGCCGCTTGGACAAATTTTACTGGCTTCTTGCAGCCATCACCACATTGAACTTGTTCATGTTTGTGATCTTTGCTCGCAAGTATAACTACAAGAATGTGCAAAAGGTGGCAGCGGCTGATTGCTACGAAGGCAAAAGTGAGGATGATGGATCAGAGACTTGGGTTTGA 1788 0.4211 MEKNKVDENPEEFNYEMKWVRDSSLDHKGRVPLRASTGSWKASLFIIAIEFSERLSYFGIATSLVIYLTKVLHQDLKTAVKNVNYWSGVTTLIPLLGGFLADAYLGRYTAVIASCIVYLMGLVLLSLSWFLPGFKPCDHPSTCTEPRRIHEVVFFLGIYLISVGTGGHKPSLESFGADQFDDNNAKERSQKMSFFNWWNSGLCSGIILGVTVIVYVQDHVNWGVADIVLTGVMAVSLLIFLIGRSSYRYRTPIGSPLTPMLQVIVAAISKRKLPYPSNPTQLYEVSKSEGNSERFLAHTKKLKFLDKAAILENEGNIAEKQSPWRLATVTKVEELKLIINMIPIWVFTLPFGICASQTSTFFIKQGAIMNRNIGNNGFVVPPASIFTLAAVGMILSVTIYDKLLVPVLRKLTGNDRGISILQRIGIGMVFSVITMIVAALVEKKRLEAVEMNGPLKGSLSMSALWLAPQFMIIGFGDGFALVGLQEYFYDQVPDSMRSLGIALYLSVIGAASFLSSLLITIVDHVTGKIGKSWIGKDLNSSRLDKFYWLLAAITTLNLFMFVIFARKYNYKNVQKVAAADCYEGKSEDDGSETWV* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0603 595 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 22 585 IPR000109 GO:0016020|GO:0022857|GO:0055085
Gso3g0603 595 SUPERFAMILY MFS general substrate transporter 34 570 IPR036259 -
Gso3g0603 595 Gene3D MFS general substrate transporter like domains 13 577 IPR036259 -
Gso3g0603 595 CDD MFS_NPF5 40 570 IPR044739 GO:0042937|GO:0042938|GO:0071916
Gso3g0603 595 Pfam POT family 108 531 IPR000109 GO:0016020|GO:0022857|GO:0055085
Gso3g0603 595 PANTHER PEPTIDE/NITRATE TRANSPORTER PLANT 22 585 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0603 Gso-Chr3 17380193 17389123 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0603 1 574 Organic Solute Cotransporters AT3G53960 65.225 0.0 806
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0603 - - gmx:100794260 1178.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g0603 3 17380193 17389123 Gso3g0603 3 17380193 17389123 ECH
Gso1g0870 1 35221618 35228257 Gso3g0603 3 17380193 17389123 GST
Gso7g1176 7 16493863 16501010 Gso3g0603 3 17380193 17389123 PCT
Gso3g0603 3 17380193 17389123 Gso7g1176 7 16493863 16501010 PCT